Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TRBV6-8A0A0A6YYG3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV6-8A0A0A6YYG3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV6-8A0A0A6YYG3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV6-8A0A0A6YYG3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV6-8A0A0A6YYG3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV6-8A0A0A6YYG3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV6-8A0A0A6YYG3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV6-8A0A0A6YYG3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV6-8A0A0A6YYG3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.28■□□□□ 0.68
TRBV6-8A0A0A6YYG3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV6-8A0A0A6YYG3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TRBV6-8A0A0A6YYG3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV6-8A0A0A6YYG3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
TRBV6-8A0A0A6YYG3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.26■□□□□ 0.67
TRBV6-8A0A0A6YYG3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV6-8A0A0A6YYG3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TRBV6-8A0A0A6YYG3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.25■□□□□ 0.67
TRBV6-8A0A0A6YYG3 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV6-8A0A0A6YYG3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV6-8A0A0A6YYG3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.24■□□□□ 0.67
TRBV6-8A0A0A6YYG3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.24■□□□□ 0.67
TRBV6-8A0A0A6YYG3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.24■□□□□ 0.67
TRBV6-8A0A0A6YYG3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TRBV6-8A0A0A6YYG3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.22■□□□□ 0.67
TRBV6-8A0A0A6YYG3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV6-8A0A0A6YYG3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV6-8A0A0A6YYG3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV6-8A0A0A6YYG3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRBV6-8A0A0A6YYG3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV6-8A0A0A6YYG3 DYNLL1-208ENST00000550178 581 ntBASIC19.18■□□□□ 0.66
TRBV6-8A0A0A6YYG3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV6-8A0A0A6YYG3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV6-8A0A0A6YYG3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV6-8A0A0A6YYG3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV6-8A0A0A6YYG3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.14■□□□□ 0.66
TRBV6-8A0A0A6YYG3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.14■□□□□ 0.65
TRBV6-8A0A0A6YYG3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV6-8A0A0A6YYG3 AC120057.4-201ENST00000624722 1615 ntBASIC19.13■□□□□ 0.65
TRBV6-8A0A0A6YYG3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV6-8A0A0A6YYG3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV6-8A0A0A6YYG3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV6-8A0A0A6YYG3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV6-8A0A0A6YYG3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.12■□□□□ 0.65
TRBV6-8A0A0A6YYG3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV6-8A0A0A6YYG3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV6-8A0A0A6YYG3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV6-8A0A0A6YYG3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TRBV6-8A0A0A6YYG3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV6-8A0A0A6YYG3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.1■□□□□ 0.65
TRBV6-8A0A0A6YYG3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.1■□□□□ 0.65
TRBV6-8A0A0A6YYG3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.09■□□□□ 0.65
TRBV6-8A0A0A6YYG3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV6-8A0A0A6YYG3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.09■□□□□ 0.65
TRBV6-8A0A0A6YYG3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV6-8A0A0A6YYG3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV6-8A0A0A6YYG3 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV6-8A0A0A6YYG3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.05■□□□□ 0.64
TRBV6-8A0A0A6YYG3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV6-8A0A0A6YYG3 AP002365.1-201ENST00000603448 772 ntBASIC19.05■□□□□ 0.64
TRBV6-8A0A0A6YYG3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV6-8A0A0A6YYG3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.04■□□□□ 0.64
TRBV6-8A0A0A6YYG3 AL031258.1-201ENST00000623562 325 ntBASIC19.04■□□□□ 0.64
TRBV6-8A0A0A6YYG3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV6-8A0A0A6YYG3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV6-8A0A0A6YYG3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV6-8A0A0A6YYG3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TRBV6-8A0A0A6YYG3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.02■□□□□ 0.63
TRBV6-8A0A0A6YYG3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV6-8A0A0A6YYG3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV6-8A0A0A6YYG3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV6-8A0A0A6YYG3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
TRBV6-8A0A0A6YYG3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19■□□□□ 0.63
TRBV6-8A0A0A6YYG3 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV6-8A0A0A6YYG3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV6-8A0A0A6YYG3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC18.97■□□□□ 0.63
TRBV6-8A0A0A6YYG3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV6-8A0A0A6YYG3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV6-8A0A0A6YYG3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV6-8A0A0A6YYG3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC18.95■□□□□ 0.62
TRBV6-8A0A0A6YYG3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC18.93■□□□□ 0.62
TRBV6-8A0A0A6YYG3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV6-8A0A0A6YYG3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV6-8A0A0A6YYG3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRBV6-8A0A0A6YYG3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV6-8A0A0A6YYG3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV6-8A0A0A6YYG3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV6-8A0A0A6YYG3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV6-8A0A0A6YYG3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV6-8A0A0A6YYG3 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV6-8A0A0A6YYG3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV6-8A0A0A6YYG3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV6-8A0A0A6YYG3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TRBV6-8A0A0A6YYG3 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV6-8A0A0A6YYG3 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV6-8A0A0A6YYG3 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV6-8A0A0A6YYG3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV6-8A0A0A6YYG3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TRBV6-8A0A0A6YYG3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV6-8A0A0A6YYG3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms