Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.84■□□□□ 0.61
TRBV20-1A0A075B6N2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV20-1A0A075B6N2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV20-1A0A075B6N2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV20-1A0A075B6N2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC18.81■□□□□ 0.6
TRBV20-1A0A075B6N2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV20-1A0A075B6N2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV20-1A0A075B6N2 ABCB10P1-201ENST00000614297 2181 ntBASIC18.78■□□□□ 0.6
TRBV20-1A0A075B6N2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.77■□□□□ 0.6
TRBV20-1A0A075B6N2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV20-1A0A075B6N2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV20-1A0A075B6N2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV20-1A0A075B6N2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV20-1A0A075B6N2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV20-1A0A075B6N2 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV20-1A0A075B6N2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV20-1A0A075B6N2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV20-1A0A075B6N2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV20-1A0A075B6N2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRBV20-1A0A075B6N2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV20-1A0A075B6N2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRBV20-1A0A075B6N2 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV20-1A0A075B6N2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV20-1A0A075B6N2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.69■□□□□ 0.58
TRBV20-1A0A075B6N2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRBV20-1A0A075B6N2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV20-1A0A075B6N2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV20-1A0A075B6N2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
TRBV20-1A0A075B6N2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV20-1A0A075B6N2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV20-1A0A075B6N2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV20-1A0A075B6N2 AC135731.1-201ENST00000569415 2548 ntBASIC18.66■□□□□ 0.58
TRBV20-1A0A075B6N2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV20-1A0A075B6N2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV20-1A0A075B6N2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRBV20-1A0A075B6N2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV20-1A0A075B6N2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV20-1A0A075B6N2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRBV20-1A0A075B6N2 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV20-1A0A075B6N2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV20-1A0A075B6N2 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC18.59■□□□□ 0.57
TRBV20-1A0A075B6N2 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV20-1A0A075B6N2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.57■□□□□ 0.56
TRBV20-1A0A075B6N2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV20-1A0A075B6N2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV20-1A0A075B6N2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV20-1A0A075B6N2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.55■□□□□ 0.56
TRBV20-1A0A075B6N2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV20-1A0A075B6N2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV20-1A0A075B6N2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV20-1A0A075B6N2 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV20-1A0A075B6N2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV20-1A0A075B6N2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV20-1A0A075B6N2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV20-1A0A075B6N2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
TRBV20-1A0A075B6N2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV20-1A0A075B6N2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV20-1A0A075B6N2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV20-1A0A075B6N2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV20-1A0A075B6N2 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC18.49■□□□□ 0.55
TRBV20-1A0A075B6N2 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TRBV20-1A0A075B6N2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV20-1A0A075B6N2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV20-1A0A075B6N2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV20-1A0A075B6N2 AC145285.7-201ENST00000614819 1539 ntBASIC18.46■□□□□ 0.55
TRBV20-1A0A075B6N2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
TRBV20-1A0A075B6N2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV20-1A0A075B6N2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV20-1A0A075B6N2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.46■□□□□ 0.55
TRBV20-1A0A075B6N2 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRBV20-1A0A075B6N2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV20-1A0A075B6N2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV20-1A0A075B6N2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV20-1A0A075B6N2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBV20-1A0A075B6N2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV20-1A0A075B6N2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV20-1A0A075B6N2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV20-1A0A075B6N2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV20-1A0A075B6N2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV20-1A0A075B6N2 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRBV20-1A0A075B6N2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV20-1A0A075B6N2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
TRBV20-1A0A075B6N2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV20-1A0A075B6N2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV20-1A0A075B6N2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.41■□□□□ 0.54
TRBV20-1A0A075B6N2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TRBV20-1A0A075B6N2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV20-1A0A075B6N2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TRBV20-1A0A075B6N2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV20-1A0A075B6N2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV20-1A0A075B6N2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV20-1A0A075B6N2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV20-1A0A075B6N2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
TRBV20-1A0A075B6N2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.39■□□□□ 0.53
TRBV20-1A0A075B6N2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV20-1A0A075B6N2 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV20-1A0A075B6N2 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TRBV20-1A0A075B6N2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV20-1A0A075B6N2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV20-1A0A075B6N2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms