Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.6■□□□□ 0.25
CLIP2Q9UDT6 AC009145.4-201ENST00000625119 1294 ntBASIC16.6■□□□□ 0.25
CLIP2Q9UDT6 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLIP2Q9UDT6 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CLIP2Q9UDT6 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC16.6■□□□□ 0.25
CLIP2Q9UDT6 AC111170.3-201ENST00000624282 2464 ntBASIC16.6■□□□□ 0.25
CLIP2Q9UDT6 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLIP2Q9UDT6 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.6■□□□□ 0.25
CLIP2Q9UDT6 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.6■□□□□ 0.25
CLIP2Q9UDT6 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.6■□□□□ 0.25
CLIP2Q9UDT6 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.6■□□□□ 0.25
CLIP2Q9UDT6 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC16.6■□□□□ 0.25
CLIP2Q9UDT6 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLIP2Q9UDT6 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLIP2Q9UDT6 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLIP2Q9UDT6 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC16.6■□□□□ 0.25
CLIP2Q9UDT6 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 HMGA1P1-201ENST00000415560 1062 ntBASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 AL512306.1-201ENST00000432698 848 ntBASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 ERP29P1-201ENST00000442902 706 ntBASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 DNM1P30-201ENST00000563586 452 ntBASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 TUBB8P4-201ENST00000511806 1324 ntBASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 RET-205ENST00000615310 4337 ntTSL 5 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLIP2Q9UDT6 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.58■□□□□ 0.25
CLIP2Q9UDT6 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC16.58■□□□□ 0.25
CLIP2Q9UDT6 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLIP2Q9UDT6 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.58■□□□□ 0.25
CLIP2Q9UDT6 AC015909.5-201ENST00000624336 2266 ntBASIC16.58■□□□□ 0.25
CLIP2Q9UDT6 AL122018.1-201ENST00000446607 2310 ntBASIC16.58■□□□□ 0.25
CLIP2Q9UDT6 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CLIP2Q9UDT6 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLIP2Q9UDT6 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLIP2Q9UDT6 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CLIP2Q9UDT6 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CLIP2Q9UDT6 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
CLIP2Q9UDT6 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLIP2Q9UDT6 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLIP2Q9UDT6 AC019294.4-201ENST00000561777 2905 ntBASIC16.58■□□□□ 0.24
CLIP2Q9UDT6 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLIP2Q9UDT6 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLIP2Q9UDT6 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLIP2Q9UDT6 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLIP2Q9UDT6 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.58■□□□□ 0.24
CLIP2Q9UDT6 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLIP2Q9UDT6 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.58■□□□□ 0.24
CLIP2Q9UDT6 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.58■□□□□ 0.24
CLIP2Q9UDT6 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CLIP2Q9UDT6 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.58■□□□□ 0.24
CLIP2Q9UDT6 RN7SL455P-201ENST00000580629 282 ntBASIC16.58■□□□□ 0.24
CLIP2Q9UDT6 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
CLIP2Q9UDT6 SIGLEC22P-201ENST00000599104 714 ntBASIC16.58■□□□□ 0.24
CLIP2Q9UDT6 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.58■□□□□ 0.24
CLIP2Q9UDT6 AC107464.3-201ENST00000609172 737 ntBASIC16.58■□□□□ 0.24
CLIP2Q9UDT6 RN7SL736P-201ENST00000613111 269 ntBASIC16.58■□□□□ 0.24
CLIP2Q9UDT6 AC005618.3-201ENST00000624928 458 ntBASIC16.58■□□□□ 0.24
CLIP2Q9UDT6 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLIP2Q9UDT6 SHMT1P1-201ENST00000419974 1312 ntBASIC16.58■□□□□ 0.24
CLIP2Q9UDT6 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLIP2Q9UDT6 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms