Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD248Q9HCU0 RPL17P11-201ENST00000417593 544 ntBASIC14.81□□□□□ -0.04
CD248Q9HCU0 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.81□□□□□ -0.04
CD248Q9HCU0 FGFR3P1-201ENST00000449999 601 ntBASIC14.81□□□□□ -0.04
CD248Q9HCU0 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.81□□□□□ -0.04
CD248Q9HCU0 LDHBP1-201ENST00000455730 1119 ntBASIC14.81□□□□□ -0.04
CD248Q9HCU0 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.81□□□□□ -0.04
CD248Q9HCU0 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.81□□□□□ -0.04
CD248Q9HCU0 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CD248Q9HCU0 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD248Q9HCU0 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.81□□□□□ -0.04
CD248Q9HCU0 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD248Q9HCU0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CD248Q9HCU0 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CD248Q9HCU0 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC14.81□□□□□ -0.04
CD248Q9HCU0 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CD248Q9HCU0 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CD248Q9HCU0 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD248Q9HCU0 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD248Q9HCU0 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD248Q9HCU0 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.81□□□□□ -0.04
CD248Q9HCU0 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD248Q9HCU0 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CD248Q9HCU0 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD248Q9HCU0 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD248Q9HCU0 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CD248Q9HCU0 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CD248Q9HCU0 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD248Q9HCU0 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD248Q9HCU0 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.8□□□□□ -0.04
CD248Q9HCU0 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD248Q9HCU0 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC14.8□□□□□ -0.04
CD248Q9HCU0 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.8□□□□□ -0.04
CD248Q9HCU0 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC14.8□□□□□ -0.04
CD248Q9HCU0 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD248Q9HCU0 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CD248Q9HCU0 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD248Q9HCU0 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD248Q9HCU0 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.8□□□□□ -0.04
CD248Q9HCU0 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD248Q9HCU0 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD248Q9HCU0 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD248Q9HCU0 AC008267.1-201ENST00000474858 1069 ntBASIC14.8□□□□□ -0.04
CD248Q9HCU0 IGLV3-15-201ENST00000518356 244 ntBASIC14.8□□□□□ -0.04
CD248Q9HCU0 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
CD248Q9HCU0 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.8□□□□□ -0.04
CD248Q9HCU0 IQSEC3P1-201ENST00000538799 536 ntBASIC14.8□□□□□ -0.04
CD248Q9HCU0 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.8□□□□□ -0.04
CD248Q9HCU0 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.8□□□□□ -0.04
CD248Q9HCU0 AC138894.2-201ENST00000602838 371 ntBASIC14.8□□□□□ -0.04
CD248Q9HCU0 AL109837.1-201ENST00000603272 613 ntBASIC14.8□□□□□ -0.04
CD248Q9HCU0 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD248Q9HCU0 YRDCP1-201ENST00000621419 643 ntBASIC14.8□□□□□ -0.04
CD248Q9HCU0 AC051619.9-201ENST00000623237 597 ntBASIC14.8□□□□□ -0.04
CD248Q9HCU0 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.8□□□□□ -0.04
CD248Q9HCU0 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.8□□□□□ -0.04
CD248Q9HCU0 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
CD248Q9HCU0 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD248Q9HCU0 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD248Q9HCU0 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD248Q9HCU0 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
CD248Q9HCU0 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD248Q9HCU0 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD248Q9HCU0 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD248Q9HCU0 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.8□□□□□ -0.04
CD248Q9HCU0 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD248Q9HCU0 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD248Q9HCU0 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.8□□□□□ -0.04
CD248Q9HCU0 LINC01165-201ENST00000445190 1623 ntBASIC14.8□□□□□ -0.04
CD248Q9HCU0 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CD248Q9HCU0 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.8□□□□□ -0.04
CD248Q9HCU0 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD248Q9HCU0 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD248Q9HCU0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CD248Q9HCU0 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CD248Q9HCU0 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD248Q9HCU0 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CD248Q9HCU0 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
CD248Q9HCU0 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD248Q9HCU0 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CD248Q9HCU0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.79□□□□□ -0.04
CD248Q9HCU0 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC14.79□□□□□ -0.04
CD248Q9HCU0 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.79□□□□□ -0.04
CD248Q9HCU0 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CD248Q9HCU0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CD248Q9HCU0 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms