Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 RAB3GAP2-202ENST00000358951 7257 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 PMEL-206ENST00000548747 2757 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 ZAN-205ENST00000613979 8669 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 ACTN1-203ENST00000394419 3464 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 ABL1-202ENST00000372348 3824 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 HDAC6-201ENST00000334136 4190 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 MROH5-205ENST00000621837 4164 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 HNRNPU-216ENST00000638716 2640 ntTSL 5 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 ZNF776-201ENST00000317178 5292 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 MUM1-214ENST00000591806 4067 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 OGDHL-202ENST00000419399 3588 ntTSL 2 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 ACSL6-206ENST00000379255 2301 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 TTC27-201ENST00000317907 2876 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 SYNE1-237ENST00000539504 3768 ntTSL 5 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 SPIB-205ENST00000595883 3791 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 CEPT1-201ENST00000357172 2198 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 ZNF17-201ENST00000307658 2716 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 EXD2-203ENST00000409018 3252 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 TRAV35-201ENST00000390462 330 ntBASIC8.23□□□□□ -1.09
SVIPQ8NHG7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 AC013410.1-201ENST00000436223 1232 ntBASIC8.23□□□□□ -1.09
SVIPQ8NHG7 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 AC073472.1-201ENST00000441433 803 ntBASIC8.23□□□□□ -1.09
SVIPQ8NHG7 MTCO1P55-201ENST00000489829 745 ntBASIC8.23□□□□□ -1.09
SVIPQ8NHG7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 BPNT1-203ENST00000414869 2357 ntTSL 2 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 TUBD1-203ENST00000346141 1490 ntTSL 2 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 SMARCAD1-204ENST00000457823 4649 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 CTNNA2-217ENST00000540488 2792 ntTSL 5 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 DOCK8-201ENST00000382329 6124 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 MCM6-201ENST00000264156 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 NFASC-207ENST00000404907 5447 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 MMS19-202ENST00000355839 3555 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 GTF3C2-202ENST00000359541 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 CACNB4-220ENST00000636129 2283 ntTSL 5 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 DHDDS-202ENST00000360009 3245 ntAPPRIS P4 TSL 2 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 RUNX1T1-204ENST00000422361 2450 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 BVES-203ENST00000446408 1500 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 MIS12-206ENST00000611091 2691 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 AC090616.6-203ENST00000579186 1945 ntBASIC8.23□□□□□ -1.09
SVIPQ8NHG7 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 TRAF3IP3-202ENST00000367024 2331 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 RNF40-204ENST00000563683 4063 ntTSL 5 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 MYO15A-201ENST00000205890 11863 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 MYO15A-217ENST00000615845 11860 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 AL031283.2-201ENST00000428747 3105 ntTSL 2 BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 NRF1-205ENST00000393232 3528 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SVIPQ8NHG7 AC131212.2-201ENST00000622917 1355 ntBASIC8.22□□□□□ -1.09
SVIPQ8NHG7 AC104461.1-202ENST00000634596 1768 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 KANSL2-201ENST00000420613 2155 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 PARP9-201ENST00000360356 3198 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 SIX1-201ENST00000247182 3996 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 SLC39A9-201ENST00000031146 5192 ntTSL 5 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 FNBP1-204ENST00000446176 5393 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 SEC24D-201ENST00000280551 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 SLC22A14-201ENST00000273173 2202 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 RMND5B-210ENST00000515098 4066 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 AC005481.1-201ENST00000409610 3456 ntTSL 4 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 LAMB3-203ENST00000391911 4305 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 N6AMT1-202ENST00000351429 4781 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 CSMD2-204ENST00000373380 4379 ntTSL 2 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 AP002884.3-201ENST00000504610 2749 ntTSL 2 BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms