RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 NISCHQ9Y2I1 1504 aa19.94■□□□□ 0.78
CSMD2-204ENST00000373380 DCAF8L2P0C7V8 631 aa18.89■□□□□ 0.61
CSMD2-204ENST00000373380 SUPT5HO00267 1087 aaKnown RBP18.33■□□□□ 0.52
CSMD2-204ENST00000373380 SHROOM4Q9ULL8 1493 aa18.04■□□□□ 0.48
CSMD2-204ENST00000373380 EHMT2Q96KQ7 1210 aa17.65■□□□□ 0.42
CSMD2-204ENST00000373380 PCGF6Q9BYE7 350 aa17.32■□□□□ 0.36
CSMD2-204ENST00000373380 FAM9AQ8IZU1 332 aaPredicted RBP17.26■□□□□ 0.35
CSMD2-204ENST00000373380 TTBK1Q5TCY1 1321 aaPredicted RBP17.06■□□□□ 0.32
CSMD2-204ENST00000373380 PELP1Q8IZL8 1130 aaKnown RBP16.91■□□□□ 0.3
CSMD2-204ENST00000373380 APLP2Q06481 763 aa16.91■□□□□ 0.3
CSMD2-204ENST00000373380 TRIM41Q8WV44 630 aa16.86■□□□□ 0.29
CSMD2-204ENST00000373380 CCDC180Q9P1Z9 1646 aa16.77■□□□□ 0.28
CSMD2-204ENST00000373380 ZCCHC6Q5VYS8 1495 aaKnown RBP16.77■□□□□ 0.27
CSMD2-204ENST00000373380 RANGAP1P46060 587 aaPredicted RBP16.74■□□□□ 0.27
CSMD2-204ENST00000373380 CCER1Q8TC90 406 aaPredicted RBP16.73■□□□□ 0.27
CSMD2-204ENST00000373380 ZEB1P37275 1124 aaPredicted RBP16.68■□□□□ 0.26
CSMD2-204ENST00000373380 PPARGC1BQ86YN6 1023 aaKnown RBP16.65■□□□□ 0.26
CSMD2-204ENST00000373380 MYT1Q01538 1121 aa16.62■□□□□ 0.25
CSMD2-204ENST00000373380 CENPBP07199 599 aaPredicted RBP16.59■□□□□ 0.25
CSMD2-204ENST00000373380 LOC105371045A0A1W2PR82 267 aa16.57■□□□□ 0.24
CSMD2-204ENST00000373380 UBTFP17480 764 aaKnown RBP16.56■□□□□ 0.24
CSMD2-204ENST00000373380 HRCP23327 699 aa16.55■□□□□ 0.24
CSMD2-204ENST00000373380 CHIC1Q5VXU3 224 aa16.54■□□□□ 0.24
CSMD2-204ENST00000373380 TRIM26Q12899 539 aaPredicted RBP16.48■□□□□ 0.23
CSMD2-204ENST00000373380 YTHDC1Q96MU7 727 aaKnown RBP16.43■□□□□ 0.22
CSMD2-204ENST00000373380 ATP1B4Q9UN42 357 aaPredicted RBP16.4■□□□□ 0.22
CSMD2-204ENST00000373380 ERICH6Q7L0X2 663 aa16.35■□□□□ 0.21
CSMD2-204ENST00000373380 DCAF1Q9Y4B6 1507 aa16.24■□□□□ 0.19
CSMD2-204ENST00000373380 HNRNPUL2Q1KMD3 747 aaKnown RBP16.12■□□□□ 0.17
CSMD2-204ENST00000373380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.11■□□□□ 0.17
CSMD2-204ENST00000373380 ITGAEP38570 1179 aa16.1■□□□□ 0.17
CSMD2-204ENST00000373380 NEFLP07196 543 aa16.06■□□□□ 0.16
CSMD2-204ENST00000373380 MYO15BQ96JP2 1530 aa16.01■□□□□ 0.15
CSMD2-204ENST00000373380 ABCC9O60706 1549 aa16■□□□□ 0.15
CSMD2-204ENST00000373380 SCRIBQ14160 1630 aa15.96■□□□□ 0.15
CSMD2-204ENST00000373380 DIEXFQ68CQ4 756 aaKnown RBP15.93■□□□□ 0.14
CSMD2-204ENST00000373380 RSF1Q96T23 1441 aaPredicted RBP15.84■□□□□ 0.13
CSMD2-204ENST00000373380 CNGB1Q14028 1251 aaPredicted RBP15.78■□□□□ 0.12
CSMD2-204ENST00000373380 POLR3GLQ9BT43 218 aa15.78■□□□□ 0.12
CSMD2-204ENST00000373380 NACADO15069 1562 aa15.75■□□□□ 0.11
CSMD2-204ENST00000373380 GTF3C3Q9Y5Q9 886 aa15.71■□□□□ 0.11
CSMD2-204ENST00000373380 PABPN1Q86U42 306 aaKnown RBP eCLIP15.71■□□□□ 0.1
CSMD2-204ENST00000373380 RB1CC1Q8TDY2 1594 aa15.63■□□□□ 0.09
CSMD2-204ENST00000373380 FAM50AQ14320 339 aaKnown RBP15.61■□□□□ 0.09
CSMD2-204ENST00000373380 NEUROD1Q13562 356 aa15.58■□□□□ 0.09
CSMD2-204ENST00000373380 ZNF316A6NFI3 1004 aaPredicted RBP15.54■□□□□ 0.08
CSMD2-204ENST00000373380 BCANQ96GW7 911 aa15.54■□□□□ 0.08
CSMD2-204ENST00000373380 CECR2Q9BXF3 1484 aa15.54■□□□□ 0.08
CSMD2-204ENST00000373380 ACIN1Q9UKV3 1341 aaKnown RBP15.5■□□□□ 0.07
CSMD2-204ENST00000373380 CSRNP3Q8WYN3 585 aa15.49■□□□□ 0.07
CSMD2-204ENST00000373380 MYT1LQ9UL68 1186 aa15.47■□□□□ 0.07
CSMD2-204ENST00000373380 MROH2BQ7Z745 1585 aa15.46■□□□□ 0.06
CSMD2-204ENST00000373380 TRIM52Q96A61 297 aa15.44■□□□□ 0.06
CSMD2-204ENST00000373380 BAZ1AQ9NRL2 1556 aaPredicted RBP15.42■□□□□ 0.06
CSMD2-204ENST00000373380 DAXXQ9UER7 740 aaPredicted RBP15.42■□□□□ 0.06
CSMD2-204ENST00000373380 P3H3Q8IVL6 736 aa15.36■□□□□ 0.05
CSMD2-204ENST00000373380 RTL5Q5HYW3 569 aaPredicted RBP15.36■□□□□ 0.05
CSMD2-204ENST00000373380 ANP32CO43423 234 aa15.34■□□□□ 0.05
CSMD2-204ENST00000373380 ZNF326Q5BKZ1 582 aaKnown RBP15.31■□□□□ 0.04
CSMD2-204ENST00000373380 WIZO95785 1651 aa15.3■□□□□ 0.04
CSMD2-204ENST00000373380 SLC4A1APQ9BWU0 796 aaKnown RBP15.27■□□□□ 0.03
CSMD2-204ENST00000373380 ARID3CA6NKF2 412 aa15.24■□□□□ 0.03
CSMD2-204ENST00000373380 SCAF1Q9H7N4 1312 aaKnown RBP15.21■□□□□ 0.03
CSMD2-204ENST00000373380 CLSPNQ9HAW4 1339 aa15.21■□□□□ 0.03
CSMD2-204ENST00000373380 EEA1Q15075 1411 aa15.2■□□□□ 0.02
CSMD2-204ENST00000373380 CDK11AQ9UQ88 783 aaPredicted RBP15.18■□□□□ 0.02
CSMD2-204ENST00000373380 TOP2AP11388 1531 aaKnown RBP15.18■□□□□ 0.02
CSMD2-204ENST00000373380 CCDC88BA6NC98 1476 aa15.18■□□□□ 0.02
CSMD2-204ENST00000373380 DDX10Q13206 875 aaKnown RBP15.14■□□□□ 0.01
CSMD2-204ENST00000373380 FBLN2P98095 1184 aa15.13■□□□□ 0.01
CSMD2-204ENST00000373380 CEP162Q5TB80 1403 aa15.12■□□□□ 0.01
CSMD2-204ENST00000373380 FKBP8Q14318 412 aa15.12■□□□□ 0.01
CSMD2-204ENST00000373380 TNIKQ9UKE5 1360 aa15.12■□□□□ 0.01
CSMD2-204ENST00000373380 MIER1Q8N108 512 aa15.12■□□□□ 0.01
CSMD2-204ENST00000373380 SMARCA4P51532 1647 aa15.11■□□□□ 0.01
CSMD2-204ENST00000373380 WRNQ14191 1432 aaPredicted RBP eCLIP15.1■□□□□ 0.01
CSMD2-204ENST00000373380 ABCC8Q09428 1581 aa15.08■□□□□ 0
CSMD2-204ENST00000373380 GOLGA3Q08378 1498 aa15.06■□□□□ 0
CSMD2-204ENST00000373380 EIF5BO60841 1220 aaKnown RBP15.06■□□□□ 0
CSMD2-204ENST00000373380 SOGA1O94964 1423 aa15.06■□□□□ 0
CSMD2-204ENST00000373380 ZNF777Q9ULD5 760 aaPredicted RBP15.03■□□□□ -0
CSMD2-204ENST00000373380 HNRNPUQ00839 825 aaKnown RBP eCLIP15.02■□□□□ -0
CSMD2-204ENST00000373380 BAZ1BQ9UIG0 1483 aaKnown RBP15.02■□□□□ -0
CSMD2-204ENST00000373380 HIRIP3Q9BW71 556 aaPredicted RBP15.01□□□□□ -0.01
CSMD2-204ENST00000373380 TONSLQ96HA7 1378 aa15□□□□□ -0.01
CSMD2-204ENST00000373380 SMARCA2P51531 1590 aa14.99□□□□□ -0.01
CSMD2-204ENST00000373380 CEP164Q9UPV0 1460 aa14.97□□□□□ -0.01
CSMD2-204ENST00000373380 FAM9BQ8IZU0 186 aa14.97□□□□□ -0.01
CSMD2-204ENST00000373380 CLIP1P30622 1438 aa14.96□□□□□ -0.01
CSMD2-204ENST00000373380 CHIC2Q9UKJ5 165 aa14.96□□□□□ -0.01
CSMD2-204ENST00000373380 NPM2Q86SE8 214 aaKnown RBP14.92□□□□□ -0.02
CSMD2-204ENST00000373380 BCL11AQ9H165 835 aa14.9□□□□□ -0.02
CSMD2-204ENST00000373380 SALL2Q9Y467 1007 aaPredicted RBP14.9□□□□□ -0.02
CSMD2-204ENST00000373380 ANP32AP39687 249 aaKnown RBP14.88□□□□□ -0.03
CSMD2-204ENST00000373380 IRX6P78412 446 aaPredicted RBP14.87□□□□□ -0.03
CSMD2-204ENST00000373380 ATAD2BQ9ULI0 1458 aa14.87□□□□□ -0.03
CSMD2-204ENST00000373380 CANXP27824 592 aaKnown RBP14.85□□□□□ -0.03
CSMD2-204ENST00000373380 RUSC2Q8N2Y8 1516 aa14.84□□□□□ -0.03
CSMD2-204ENST00000373380 MRS2Q9HD23 443 aa14.81□□□□□ -0.04
CSMD2-204ENST00000373380 TMC1Q8TDI8 760 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms