RNA–Protein interactions for RNA: ENST00000247182.6

SIX1-201, Transcript of SIX homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX1, Length 3,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-201ENST00000247182 NISCHQ9Y2I1 1504 aa18.34■□□□□ 0.53
SIX1-201ENST00000247182 SHROOM4Q9ULL8 1493 aa17.02■□□□□ 0.32
SIX1-201ENST00000247182 SUPT5HO00267 1087 aaKnown RBP16.9■□□□□ 0.3
SIX1-201ENST00000247182 DCAF8L2P0C7V8 631 aa16.83■□□□□ 0.28
SIX1-201ENST00000247182 PELP1Q8IZL8 1130 aaKnown RBP16.52■□□□□ 0.23
SIX1-201ENST00000247182 PCGF6Q9BYE7 350 aa16.45■□□□□ 0.22
SIX1-201ENST00000247182 HRCP23327 699 aa16.32■□□□□ 0.2
SIX1-201ENST00000247182 PPARGC1BQ86YN6 1023 aaKnown RBP16.31■□□□□ 0.2
SIX1-201ENST00000247182 EHMT2Q96KQ7 1210 aa16.09■□□□□ 0.17
SIX1-201ENST00000247182 MYT1Q01538 1121 aa16.03■□□□□ 0.16
SIX1-201ENST00000247182 CHIC1Q5VXU3 224 aa15.91■□□□□ 0.14
SIX1-201ENST00000247182 LOC105371045A0A1W2PR82 267 aa15.88■□□□□ 0.13
SIX1-201ENST00000247182 FAM9AQ8IZU1 332 aaPredicted RBP15.81■□□□□ 0.12
SIX1-201ENST00000247182 MYO15BQ96JP2 1530 aa15.66■□□□□ 0.1
SIX1-201ENST00000247182 CENPBP07199 599 aaPredicted RBP15.63■□□□□ 0.09
SIX1-201ENST00000247182 SCAF1Q9H7N4 1312 aaKnown RBP15.62■□□□□ 0.09
SIX1-201ENST00000247182 ZEB1P37275 1124 aaPredicted RBP15.53■□□□□ 0.08
SIX1-201ENST00000247182 TTBK1Q5TCY1 1321 aaPredicted RBP15.53■□□□□ 0.08
SIX1-201ENST00000247182 YTHDC1Q96MU7 727 aaKnown RBP15.53■□□□□ 0.08
SIX1-201ENST00000247182 GTF3C3Q9Y5Q9 886 aa15.48■□□□□ 0.07
SIX1-201ENST00000247182 TRIM26Q12899 539 aaPredicted RBP15.43■□□□□ 0.06
SIX1-201ENST00000247182 TRIM41Q8WV44 630 aa15.43■□□□□ 0.06
SIX1-201ENST00000247182 ZCCHC6Q5VYS8 1495 aaKnown RBP15.41■□□□□ 0.06
SIX1-201ENST00000247182 CCER1Q8TC90 406 aaPredicted RBP15.33■□□□□ 0.04
SIX1-201ENST00000247182 ACIN1Q9UKV3 1341 aaKnown RBP15.31■□□□□ 0.04
SIX1-201ENST00000247182 NEUROD1Q13562 356 aa15.26■□□□□ 0.03
SIX1-201ENST00000247182 DIEXFQ68CQ4 756 aaKnown RBP15.15■□□□□ 0.02
SIX1-201ENST00000247182 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.1■□□□□ 0.01
SIX1-201ENST00000247182 RANGAP1P46060 587 aaPredicted RBP15.07■□□□□ 0
SIX1-201ENST00000247182 ERICH6Q7L0X2 663 aa14.97□□□□□ -0.01
SIX1-201ENST00000247182 DCAF1Q9Y4B6 1507 aa14.96□□□□□ -0.01
SIX1-201ENST00000247182 CCDC180Q9P1Z9 1646 aa14.93□□□□□ -0.02
SIX1-201ENST00000247182 BCL11AQ9H165 835 aa14.9□□□□□ -0.02
SIX1-201ENST00000247182 SCRIBQ14160 1630 aa14.89□□□□□ -0.03
SIX1-201ENST00000247182 UBTFP17480 764 aaKnown RBP14.89□□□□□ -0.03
SIX1-201ENST00000247182 ABCC9O60706 1549 aa14.89□□□□□ -0.03
SIX1-201ENST00000247182 RSF1Q96T23 1441 aaPredicted RBP14.81□□□□□ -0.04
SIX1-201ENST00000247182 BCANQ96GW7 911 aa14.79□□□□□ -0.04
SIX1-201ENST00000247182 HNRNPUL2Q1KMD3 747 aaKnown RBP14.76□□□□□ -0.05
SIX1-201ENST00000247182 PABPN1Q86U42 306 aaKnown RBP eCLIP14.68□□□□□ -0.06
SIX1-201ENST00000247182 ANP32EQ9BTT0 268 aa14.66□□□□□ -0.06
SIX1-201ENST00000247182 NEFLP07196 543 aa14.66□□□□□ -0.06
SIX1-201ENST00000247182 CECR2Q9BXF3 1484 aa14.66□□□□□ -0.06
SIX1-201ENST00000247182 RB1CC1Q8TDY2 1594 aa14.64□□□□□ -0.07
SIX1-201ENST00000247182 ZNF316A6NFI3 1004 aaPredicted RBP14.62□□□□□ -0.07
SIX1-201ENST00000247182 APLP2Q06481 763 aa14.62□□□□□ -0.07
SIX1-201ENST00000247182 MIER1Q8N108 512 aa14.56□□□□□ -0.08
SIX1-201ENST00000247182 CSRNP3Q8WYN3 585 aa14.54□□□□□ -0.08
SIX1-201ENST00000247182 ITGAEP38570 1179 aa14.52□□□□□ -0.09
SIX1-201ENST00000247182 MROH2BQ7Z745 1585 aa14.46□□□□□ -0.09
SIX1-201ENST00000247182 ATP1B4Q9UN42 357 aaPredicted RBP14.39□□□□□ -0.11
SIX1-201ENST00000247182 FKBP8Q14318 412 aa14.38□□□□□ -0.11
SIX1-201ENST00000247182 SOGA1O94964 1423 aa14.36□□□□□ -0.11
SIX1-201ENST00000247182 SUPT16HQ9Y5B9 1047 aaKnown RBP14.35□□□□□ -0.11
SIX1-201ENST00000247182 ABCC8Q09428 1581 aa14.35□□□□□ -0.11
SIX1-201ENST00000247182 WIZO95785 1651 aa14.33□□□□□ -0.11
SIX1-201ENST00000247182 PRKCSHP14314 528 aaPredicted RBP14.33□□□□□ -0.12
SIX1-201ENST00000247182 CEP162Q5TB80 1403 aa14.32□□□□□ -0.12
SIX1-201ENST00000247182 CCDC88BA6NC98 1476 aa14.32□□□□□ -0.12
SIX1-201ENST00000247182 TSHZ2Q9NRE2 1034 aa14.31□□□□□ -0.12
SIX1-201ENST00000247182 RTL5Q5HYW3 569 aaPredicted RBP14.27□□□□□ -0.13
SIX1-201ENST00000247182 EIF5BO60841 1220 aaKnown RBP14.26□□□□□ -0.13
SIX1-201ENST00000247182 RUSC2Q8N2Y8 1516 aa14.25□□□□□ -0.13
SIX1-201ENST00000247182 NBR1Q14596 966 aa14.25□□□□□ -0.13
SIX1-201ENST00000247182 CDK11AQ9UQ88 783 aaPredicted RBP14.21□□□□□ -0.14
SIX1-201ENST00000247182 RTN4Q9NQC3 1192 aaKnown RBP14.17□□□□□ -0.14
SIX1-201ENST00000247182 CLSPNQ9HAW4 1339 aa14.17□□□□□ -0.14
SIX1-201ENST00000247182 RBM19Q9Y4C8 960 aaKnown RBP14.14□□□□□ -0.15
SIX1-201ENST00000247182 P3H3Q8IVL6 736 aa14.13□□□□□ -0.15
SIX1-201ENST00000247182 TNIKQ9UKE5 1360 aa14.11□□□□□ -0.15
SIX1-201ENST00000247182 TRIM52Q96A61 297 aa14.11□□□□□ -0.15
SIX1-201ENST00000247182 HIRIP3Q9BW71 556 aaPredicted RBP14.1□□□□□ -0.15
SIX1-201ENST00000247182 IRX6P78412 446 aaPredicted RBP14.09□□□□□ -0.15
SIX1-201ENST00000247182 NACADO15069 1562 aa14.09□□□□□ -0.15
SIX1-201ENST00000247182 CLIP1P30622 1438 aa14.09□□□□□ -0.15
SIX1-201ENST00000247182 CCDC136Q96JN2 1154 aa14.08□□□□□ -0.15
SIX1-201ENST00000247182 FAM50AQ14320 339 aaKnown RBP14.07□□□□□ -0.16
SIX1-201ENST00000247182 DEKP35659 375 aaKnown RBP14.07□□□□□ -0.16
SIX1-201ENST00000247182 CNGB1Q14028 1251 aaPredicted RBP14.06□□□□□ -0.16
SIX1-201ENST00000247182 WRNQ14191 1432 aaPredicted RBP eCLIP14.05□□□□□ -0.16
SIX1-201ENST00000247182 BAZ1AQ9NRL2 1556 aaPredicted RBP14.05□□□□□ -0.16
SIX1-201ENST00000247182 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.03□□□□□ -0.16
SIX1-201ENST00000247182 GOLGA3Q08378 1498 aa14.02□□□□□ -0.17
SIX1-201ENST00000247182 KANK4Q5T7N3 995 aaPredicted RBP14.02□□□□□ -0.17
SIX1-201ENST00000247182 ANO8Q9HCE9 1232 aaPredicted RBP14.02□□□□□ -0.17
SIX1-201ENST00000247182 DDX10Q13206 875 aaKnown RBP13.98□□□□□ -0.17
SIX1-201ENST00000247182 MYT1LQ9UL68 1186 aa13.96□□□□□ -0.18
SIX1-201ENST00000247182 KCNH8Q96L42 1107 aa13.95□□□□□ -0.18
SIX1-201ENST00000247182 NPM2Q86SE8 214 aaKnown RBP13.93□□□□□ -0.18
SIX1-201ENST00000247182 ANP32CO43423 234 aa13.91□□□□□ -0.18
SIX1-201ENST00000247182 TOP2AP11388 1531 aaKnown RBP13.9□□□□□ -0.18
SIX1-201ENST00000247182 SIN3AQ96ST3 1273 aa13.9□□□□□ -0.18
SIX1-201ENST00000247182 DAXXQ9UER7 740 aaPredicted RBP13.9□□□□□ -0.18
SIX1-201ENST00000247182 RAPGEF2Q9Y4G8 1499 aa13.89□□□□□ -0.19
SIX1-201ENST00000247182 ARID3CA6NKF2 412 aa13.89□□□□□ -0.19
SIX1-201ENST00000247182 ANP32AP39687 249 aaKnown RBP13.88□□□□□ -0.19
SIX1-201ENST00000247182 CEP164Q9UPV0 1460 aa13.87□□□□□ -0.19
SIX1-201ENST00000247182 SMARCA2P51531 1590 aa13.87□□□□□ -0.19
SIX1-201ENST00000247182 EEA1Q15075 1411 aa13.87□□□□□ -0.19
SIX1-201ENST00000247182 HNRNPUQ00839 825 aaKnown RBP eCLIP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms