RNA–Protein interactions for RNA: ENST00000316549.10

SLC9A9-201, Transcript of solute carrier family 9 member A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC9A9, Length 3,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A9-201ENST00000316549 NISCHQ9Y2I1 1504 aa16.51■□□□□ 0.23
SLC9A9-201ENST00000316549 CHIC1Q5VXU3 224 aa15.49■□□□□ 0.07
SLC9A9-201ENST00000316549 AEBP2Q6ZN18 517 aaPredicted RBP14.9□□□□□ -0.02
SLC9A9-201ENST00000316549 EHMT2Q96KQ7 1210 aa14.83□□□□□ -0.04
SLC9A9-201ENST00000316549 SLC24A1O60721 1099 aa14.8□□□□□ -0.04
SLC9A9-201ENST00000316549 CCDC180Q9P1Z9 1646 aa14.45□□□□□ -0.1
SLC9A9-201ENST00000316549 PLPPR3Q6T4P5 718 aa14.13□□□□□ -0.15
SLC9A9-201ENST00000316549 PHF23Q9BUL5 403 aaPredicted RBP14.09□□□□□ -0.15
SLC9A9-201ENST00000316549 ZCCHC6Q5VYS8 1495 aaKnown RBP13.93□□□□□ -0.18
SLC9A9-201ENST00000316549 RTN4Q9NQC3 1192 aaKnown RBP13.84□□□□□ -0.19
SLC9A9-201ENST00000316549 DCAF1Q9Y4B6 1507 aa13.75□□□□□ -0.21
SLC9A9-201ENST00000316549 KCNA4P22459 653 aa13.59□□□□□ -0.23
SLC9A9-201ENST00000316549 MYO15BQ96JP2 1530 aa13.56□□□□□ -0.24
SLC9A9-201ENST00000316549 CSRNP3Q8WYN3 585 aa13.51□□□□□ -0.25
SLC9A9-201ENST00000316549 NACADO15069 1562 aa13.33□□□□□ -0.28
SLC9A9-201ENST00000316549 ABCC9O60706 1549 aa13.28□□□□□ -0.28
SLC9A9-201ENST00000316549 PRKCSHP14314 528 aaPredicted RBP13.25□□□□□ -0.29
SLC9A9-201ENST00000316549 SHROOM4Q9ULL8 1493 aa13.22□□□□□ -0.29
SLC9A9-201ENST00000316549 AMER1Q5JTC6 1135 aaPredicted RBP13.19□□□□□ -0.3
SLC9A9-201ENST00000316549 RB1CC1Q8TDY2 1594 aa13.14□□□□□ -0.31
SLC9A9-201ENST00000316549 SCRIBQ14160 1630 aa13.13□□□□□ -0.31
SLC9A9-201ENST00000316549 UNC13AQ9UPW8 1703 aa13.13□□□□□ -0.31
SLC9A9-201ENST00000316549 DCAF8L2P0C7V8 631 aa13.05□□□□□ -0.32
SLC9A9-201ENST00000316549 NCBP3Q53F19 620 aaKnown RBP13.03□□□□□ -0.32
SLC9A9-201ENST00000316549 SLC4A1APQ9BWU0 796 aaKnown RBP12.99□□□□□ -0.33
SLC9A9-201ENST00000316549 BICRAQ9NZM4 1560 aa12.93□□□□□ -0.34
SLC9A9-201ENST00000316549 ADRA2BP18089 450 aa12.92□□□□□ -0.34
SLC9A9-201ENST00000316549 DAXXQ9UER7 740 aaPredicted RBP12.92□□□□□ -0.34
SLC9A9-201ENST00000316549 RSF1Q96T23 1441 aaPredicted RBP12.81□□□□□ -0.36
SLC9A9-201ENST00000316549 CECR2Q9BXF3 1484 aa12.79□□□□□ -0.36
SLC9A9-201ENST00000316549 MROH2BQ7Z745 1585 aa12.76□□□□□ -0.37
SLC9A9-201ENST00000316549 SMARCA4P51532 1647 aa12.69□□□□□ -0.38
SLC9A9-201ENST00000316549 BAZ1AQ9NRL2 1556 aaPredicted RBP12.68□□□□□ -0.38
SLC9A9-201ENST00000316549 WIZO95785 1651 aa12.68□□□□□ -0.38
SLC9A9-201ENST00000316549 TIMELESSQ9UNS1 1208 aa12.68□□□□□ -0.38
SLC9A9-201ENST00000316549 SUPT5HO00267 1087 aaKnown RBP12.67□□□□□ -0.38
SLC9A9-201ENST00000316549 PEG3Q9GZU2 1588 aa12.64□□□□□ -0.39
SLC9A9-201ENST00000316549 TULP1O00294 542 aaPredicted RBP12.6□□□□□ -0.39
SLC9A9-201ENST00000316549 EIF4G1Q04637 1599 aaKnown RBP12.58□□□□□ -0.4
SLC9A9-201ENST00000316549 ZBTB22O15209 634 aa12.57□□□□□ -0.4
SLC9A9-201ENST00000316549 TAOK2Q9UL54 1235 aa12.56□□□□□ -0.4
SLC9A9-201ENST00000316549 TOP2AP11388 1531 aaKnown RBP12.54□□□□□ -0.4
SLC9A9-201ENST00000316549 TPRNQ4KMQ1 711 aa12.54□□□□□ -0.4
SLC9A9-201ENST00000316549 PABPN1Q86U42 306 aaKnown RBP eCLIP12.46□□□□□ -0.42
SLC9A9-201ENST00000316549 SMARCA2P51531 1590 aa12.46□□□□□ -0.42
SLC9A9-201ENST00000316549 HAP1P54257 671 aaPredicted RBP12.42□□□□□ -0.42
SLC9A9-201ENST00000316549 ATAD2BQ9ULI0 1458 aa12.4□□□□□ -0.43
SLC9A9-201ENST00000316549 CCDC88BA6NC98 1476 aa12.37□□□□□ -0.43
SLC9A9-201ENST00000316549 BCANQ96GW7 911 aa12.35□□□□□ -0.43
SLC9A9-201ENST00000316549 HMGXB3Q12766 1538 aa12.33□□□□□ -0.44
SLC9A9-201ENST00000316549 NCAPD3P42695 1498 aa12.29□□□□□ -0.44
SLC9A9-201ENST00000316549 PLCB2Q00722 1185 aa12.29□□□□□ -0.44
SLC9A9-201ENST00000316549 FKBP8Q14318 412 aa12.28□□□□□ -0.44
SLC9A9-201ENST00000316549 ARXQ96QS3 562 aa12.27□□□□□ -0.45
SLC9A9-201ENST00000316549 BAZ1BQ9UIG0 1483 aaKnown RBP12.23□□□□□ -0.45
SLC9A9-201ENST00000316549 PPP6R1Q9UPN7 881 aa12.2□□□□□ -0.46
SLC9A9-201ENST00000316549 NPM3O75607 178 aaKnown RBP12.19□□□□□ -0.46
SLC9A9-201ENST00000316549 CC2D2AQ9P2K1 1620 aa12.18□□□□□ -0.46
SLC9A9-201ENST00000316549 PRDM2Q13029 1718 aa12.16□□□□□ -0.46
SLC9A9-201ENST00000316549 ABCC8Q09428 1581 aa12.12□□□□□ -0.47
SLC9A9-201ENST00000316549 PODXL2Q9NZ53 605 aa12.11□□□□□ -0.47
SLC9A9-201ENST00000316549 RANGAP1P46060 587 aaPredicted RBP12.11□□□□□ -0.47
SLC9A9-201ENST00000316549 HOMEZQ8IX15 550 aa12.08□□□□□ -0.48
SLC9A9-201ENST00000316549 SYNJ1O43426 1573 aa12.06□□□□□ -0.48
SLC9A9-201ENST00000316549 BIVM-ERCC5R4GMW8 1640 aa12.06□□□□□ -0.48
SLC9A9-201ENST00000316549 CFTRP13569 1480 aa12.05□□□□□ -0.48
SLC9A9-201ENST00000316549 GTF3C3Q9Y5Q9 886 aa12.04□□□□□ -0.48
SLC9A9-201ENST00000316549 KLHL34Q8N239 644 aa12.02□□□□□ -0.48
SLC9A9-201ENST00000316549 TOP2BQ02880 1626 aa12□□□□□ -0.49
SLC9A9-201ENST00000316549 PPP4R3CPQ6ZMV5 832 aa11.96□□□□□ -0.49
SLC9A9-201ENST00000316549 SENP3Q9H4L4 574 aaPredicted RBP11.96□□□□□ -0.5
SLC9A9-201ENST00000316549 TRIM41Q8WV44 630 aa11.94□□□□□ -0.5
SLC9A9-201ENST00000316549 WRNQ14191 1432 aaPredicted RBP eCLIP11.94□□□□□ -0.5
SLC9A9-201ENST00000316549 FBLN2P98095 1184 aa11.94□□□□□ -0.5
SLC9A9-201ENST00000316549 CUX1P39880 1505 aa11.93□□□□□ -0.5
SLC9A9-201ENST00000316549 RUSC2Q8N2Y8 1516 aa11.89□□□□□ -0.51
SLC9A9-201ENST00000316549 KDM2AQ9Y2K7 1162 aa11.88□□□□□ -0.51
SLC9A9-201ENST00000316549 CADPSQ9ULU8 1353 aa11.88□□□□□ -0.51
SLC9A9-201ENST00000316549 SOGA1O94964 1423 aa11.88□□□□□ -0.51
SLC9A9-201ENST00000316549 LOC105371045A0A1W2PR82 267 aa11.86□□□□□ -0.51
SLC9A9-201ENST00000316549 LAMC3Q9Y6N6 1575 aa11.86□□□□□ -0.51
SLC9A9-201ENST00000316549 EEA1Q15075 1411 aa11.83□□□□□ -0.52
SLC9A9-201ENST00000316549 C14orf37Q86TY3 774 aa11.83□□□□□ -0.52
SLC9A9-201ENST00000316549 KIF21BO75037 1637 aa11.83□□□□□ -0.52
SLC9A9-201ENST00000316549 NESP48681 1621 aa11.79□□□□□ -0.52
SLC9A9-201ENST00000316549 DNAJC5BQ9UF47 199 aa11.79□□□□□ -0.52
SLC9A9-201ENST00000316549 WDR97A6NE52 1622 aa11.79□□□□□ -0.52
SLC9A9-201ENST00000316549 KIF21AQ7Z4S6 1674 aa11.77□□□□□ -0.53
SLC9A9-201ENST00000316549 FANCD2Q9BXW9 1451 aa11.76□□□□□ -0.53
SLC9A9-201ENST00000316549 DNMBPQ6XZF7 1577 aa11.76□□□□□ -0.53
SLC9A9-201ENST00000316549 HRCP23327 699 aa11.74□□□□□ -0.53
SLC9A9-201ENST00000316549 APLP2Q06481 763 aa11.74□□□□□ -0.53
SLC9A9-201ENST00000316549 TMEM132AQ24JP5 1023 aa11.72□□□□□ -0.53
SLC9A9-201ENST00000316549 FOXD4L1Q9NU39 408 aa11.72□□□□□ -0.53
SLC9A9-201ENST00000316549 URB2Q14146 1524 aaKnown RBP11.71□□□□□ -0.53
SLC9A9-201ENST00000316549 PRXQ9BXM0 1461 aa11.71□□□□□ -0.53
SLC9A9-201ENST00000316549 TOPBP1Q92547 1522 aa11.7□□□□□ -0.54
SLC9A9-201ENST00000316549 ERICH3Q5RHP9 1530 aa11.7□□□□□ -0.54
SLC9A9-201ENST00000316549 VSIG10Q8N0Z9 540 aa11.69□□□□□ -0.54
SLC9A9-201ENST00000316549 FGD5Q6ZNL6 1462 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms