Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 KLF17P1-201ENST00000547105 1126 ntBASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 AC016629.1-201ENST00000596579 586 ntBASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 CR392039.2-201ENST00000623182 509 ntBASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 KRT8P18-201ENST00000413425 1445 ntBASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 MAGEA5-201ENST00000446757 942 ntBASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 FTH1P22-201ENST00000456305 520 ntBASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 KRT18P8-201ENST00000581937 1246 ntBASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 AC020658.7-201ENST00000624274 2442 ntBASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 FMO6P-201ENST00000236166 1620 ntBASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD3Q7Z3D4 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 AC004554.1-201ENST00000422830 1468 ntBASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms