Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.61□□□□□ -0.39
CDK5Q00535 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
CDK5Q00535 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.61□□□□□ -0.39
CDK5Q00535 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
CDK5Q00535 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.61□□□□□ -0.39
CDK5Q00535 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CDK5Q00535 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CDK5Q00535 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDK5Q00535 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CDK5Q00535 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.61□□□□□ -0.39
CDK5Q00535 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDK5Q00535 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CDK5Q00535 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.61□□□□□ -0.39
CDK5Q00535 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDK5Q00535 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC12.61□□□□□ -0.39
CDK5Q00535 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.61□□□□□ -0.39
CDK5Q00535 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.61□□□□□ -0.39
CDK5Q00535 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
CDK5Q00535 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDK5Q00535 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDK5Q00535 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDK5Q00535 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.61□□□□□ -0.39
CDK5Q00535 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDK5Q00535 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CDK5Q00535 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.61□□□□□ -0.39
CDK5Q00535 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.61□□□□□ -0.39
CDK5Q00535 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.61□□□□□ -0.39
CDK5Q00535 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CDK5Q00535 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.61□□□□□ -0.39
CDK5Q00535 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.6□□□□□ -0.39
CDK5Q00535 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CDK5Q00535 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.6□□□□□ -0.39
CDK5Q00535 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.6□□□□□ -0.39
CDK5Q00535 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
CDK5Q00535 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.6□□□□□ -0.39
CDK5Q00535 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.6□□□□□ -0.39
CDK5Q00535 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.6□□□□□ -0.39
CDK5Q00535 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.6□□□□□ -0.39
CDK5Q00535 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.6□□□□□ -0.39
CDK5Q00535 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.6□□□□□ -0.39
CDK5Q00535 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.6□□□□□ -0.39
CDK5Q00535 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.6□□□□□ -0.39
CDK5Q00535 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.6□□□□□ -0.39
CDK5Q00535 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.6□□□□□ -0.39
CDK5Q00535 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.6□□□□□ -0.39
CDK5Q00535 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CDK5Q00535 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CDK5Q00535 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.6□□□□□ -0.39
CDK5Q00535 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 BRD7P5-201ENST00000299197 1822 ntBASIC12.6□□□□□ -0.39
CDK5Q00535 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDK5Q00535 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CDK5Q00535 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CDK5Q00535 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDK5Q00535 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.59□□□□□ -0.39
CDK5Q00535 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDK5Q00535 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
CDK5Q00535 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.59□□□□□ -0.39
CDK5Q00535 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDK5Q00535 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDK5Q00535 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDK5Q00535 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDK5Q00535 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDK5Q00535 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.59□□□□□ -0.39
CDK5Q00535 GDA-203ENST00000376986 1771 ntTSL 2 BASIC12.59□□□□□ -0.39
CDK5Q00535 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CDK5Q00535 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CDK5Q00535 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC12.59□□□□□ -0.39
CDK5Q00535 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC12.59□□□□□ -0.39
CDK5Q00535 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDK5Q00535 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDK5Q00535 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.59□□□□□ -0.39
CDK5Q00535 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDK5Q00535 SSR4P1-201ENST00000415143 412 ntBASIC12.59□□□□□ -0.39
CDK5Q00535 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.59□□□□□ -0.39
CDK5Q00535 CTBP2P5-201ENST00000454986 1264 ntBASIC12.59□□□□□ -0.39
CDK5Q00535 TUBB8P8-201ENST00000458717 1058 ntBASIC12.59□□□□□ -0.39
CDK5Q00535 RN7SL692P-201ENST00000464677 288 ntBASIC12.59□□□□□ -0.39
CDK5Q00535 HLA-J-204ENST00000495278 958 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms