Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 ACTG1P2-201ENST00000415776 1125 ntBASIC12.21□□□□□ -0.45
HIST1H3AP68431 GPAA1P2-201ENST00000417923 928 ntBASIC12.21□□□□□ -0.45
HIST1H3AP68431 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 ACTG1P11-201ENST00000425411 1125 ntBASIC12.21□□□□□ -0.45
HIST1H3AP68431 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.21□□□□□ -0.45
HIST1H3AP68431 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 LINC01783-202ENST00000614408 828 ntBASIC12.21□□□□□ -0.45
HIST1H3AP68431 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 BX284668.2-205ENST00000619677 828 ntBASIC12.21□□□□□ -0.45
HIST1H3AP68431 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H3AP68431 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H3AP68431 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
HIST1H3AP68431 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H3AP68431 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
HIST1H3AP68431 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
HIST1H3AP68431 AL133338.1-201ENST00000565695 1517 ntBASIC12.21□□□□□ -0.46
HIST1H3AP68431 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
HIST1H3AP68431 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
HIST1H3AP68431 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H3AP68431 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.21□□□□□ -0.46
HIST1H3AP68431 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
HIST1H3AP68431 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H3AP68431 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H3AP68431 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.21□□□□□ -0.46
HIST1H3AP68431 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
HIST1H3AP68431 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H3AP68431 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H3AP68431 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H3AP68431 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
HIST1H3AP68431 AL139385.1-201ENST00000611744 3272 ntBASIC12.21□□□□□ -0.46
HIST1H3AP68431 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.2□□□□□ -0.46
HIST1H3AP68431 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
HIST1H3AP68431 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
HIST1H3AP68431 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
HIST1H3AP68431 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
HIST1H3AP68431 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
HIST1H3AP68431 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
HIST1H3AP68431 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.2□□□□□ -0.46
HIST1H3AP68431 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
HIST1H3AP68431 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
HIST1H3AP68431 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
HIST1H3AP68431 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.2□□□□□ -0.46
HIST1H3AP68431 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.2□□□□□ -0.46
HIST1H3AP68431 FNTAP2-201ENST00000430308 634 ntBASIC12.2□□□□□ -0.46
HIST1H3AP68431 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
HIST1H3AP68431 KLF17P1-201ENST00000547105 1126 ntBASIC12.2□□□□□ -0.46
HIST1H3AP68431 MIR3940-201ENST00000579148 102 ntBASIC12.2□□□□□ -0.46
HIST1H3AP68431 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms