Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
XPAP23025 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
XPAP23025 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.14□□□□□ -0.15
XPAP23025 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
XPAP23025 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.14□□□□□ -0.15
XPAP23025 PYY2-201ENST00000315776 282 ntBASIC14.14□□□□□ -0.15
XPAP23025 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
XPAP23025 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.14□□□□□ -0.15
XPAP23025 MPV17-204ENST00000399052 749 ntTSL 4 BASIC14.14□□□□□ -0.15
XPAP23025 LINC00265-2P-201ENST00000413372 782 ntBASIC14.14□□□□□ -0.15
XPAP23025 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.14□□□□□ -0.15
XPAP23025 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.14□□□□□ -0.15
XPAP23025 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.14□□□□□ -0.15
XPAP23025 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.14□□□□□ -0.15
XPAP23025 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
XPAP23025 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.14□□□□□ -0.15
XPAP23025 NDUFS6P1-201ENST00000485187 316 ntBASIC14.14□□□□□ -0.15
XPAP23025 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.14□□□□□ -0.15
XPAP23025 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.14□□□□□ -0.15
XPAP23025 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.14□□□□□ -0.15
XPAP23025 KLF17P1-201ENST00000547105 1126 ntBASIC14.14□□□□□ -0.15
XPAP23025 AC007881.3-201ENST00000608897 607 ntBASIC14.14□□□□□ -0.15
XPAP23025 AC242376.2-201ENST00000619355 883 ntBASIC14.14□□□□□ -0.15
XPAP23025 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.14□□□□□ -0.15
XPAP23025 AL157996.1-201ENST00000624684 2299 ntBASIC14.14□□□□□ -0.15
XPAP23025 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
XPAP23025 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
XPAP23025 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
XPAP23025 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
XPAP23025 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
XPAP23025 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
XPAP23025 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
XPAP23025 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
XPAP23025 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.14□□□□□ -0.15
XPAP23025 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
XPAP23025 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
XPAP23025 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
XPAP23025 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC14.14□□□□□ -0.15
XPAP23025 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
XPAP23025 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.13□□□□□ -0.15
XPAP23025 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.13□□□□□ -0.15
XPAP23025 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 HLA-DMA-203ENST00000395305 777 ntBASIC14.13□□□□□ -0.15
XPAP23025 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.13□□□□□ -0.15
XPAP23025 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.13□□□□□ -0.15
XPAP23025 AC069218.1-201ENST00000435269 762 ntBASIC14.13□□□□□ -0.15
XPAP23025 AC078991.1-201ENST00000437297 610 ntBASIC14.13□□□□□ -0.15
XPAP23025 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.13□□□□□ -0.15
XPAP23025 GRPEL2P1-201ENST00000453145 339 ntBASIC14.13□□□□□ -0.15
XPAP23025 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.13□□□□□ -0.15
XPAP23025 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.13□□□□□ -0.15
XPAP23025 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.13□□□□□ -0.15
XPAP23025 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.13□□□□□ -0.15
XPAP23025 NUDT4P2-201ENST00000578341 546 ntBASIC14.13□□□□□ -0.15
XPAP23025 AC132825.4-202ENST00000578792 434 ntBASIC14.13□□□□□ -0.15
XPAP23025 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.13□□□□□ -0.15
XPAP23025 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.13□□□□□ -0.15
XPAP23025 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 KRT8P18-201ENST00000413425 1445 ntBASIC14.13□□□□□ -0.15
XPAP23025 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.13□□□□□ -0.15
XPAP23025 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
XPAP23025 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.13□□□□□ -0.15
XPAP23025 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.13□□□□□ -0.15
XPAP23025 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.13□□□□□ -0.15
XPAP23025 AC092123.2-201ENST00000611189 5421 ntBASIC14.12□□□□□ -0.15
XPAP23025 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
XPAP23025 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
XPAP23025 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
XPAP23025 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
XPAP23025 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
XPAP23025 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.12□□□□□ -0.15
XPAP23025 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.12□□□□□ -0.15
XPAP23025 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
XPAP23025 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
XPAP23025 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
XPAP23025 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms