Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
KRT6AP02538 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
KRT6AP02538 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.62□□□□□ -0.23
KRT6AP02538 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
KRT6AP02538 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
KRT6AP02538 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KRT6AP02538 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.62□□□□□ -0.23
KRT6AP02538 AC020917.4-201ENST00000623994 1999 ntBASIC13.62□□□□□ -0.23
KRT6AP02538 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
KRT6AP02538 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
KRT6AP02538 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.61□□□□□ -0.23
KRT6AP02538 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 FMO6P-201ENST00000236166 1620 ntBASIC13.61□□□□□ -0.23
KRT6AP02538 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.61□□□□□ -0.23
KRT6AP02538 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.61□□□□□ -0.23
KRT6AP02538 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
KRT6AP02538 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
KRT6AP02538 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
KRT6AP02538 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.61□□□□□ -0.23
KRT6AP02538 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.61□□□□□ -0.23
KRT6AP02538 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.61□□□□□ -0.23
KRT6AP02538 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.61□□□□□ -0.23
KRT6AP02538 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.61□□□□□ -0.23
KRT6AP02538 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.61□□□□□ -0.23
KRT6AP02538 GOLGA2P4-201ENST00000441462 777 ntBASIC13.61□□□□□ -0.23
KRT6AP02538 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.61□□□□□ -0.23
KRT6AP02538 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.61□□□□□ -0.23
KRT6AP02538 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
KRT6AP02538 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.61□□□□□ -0.23
KRT6AP02538 SNORD3B-2-202ENST00000571722 791 ntBASIC13.61□□□□□ -0.23
KRT6AP02538 AC104982.3-201ENST00000581995 514 ntBASIC13.61□□□□□ -0.23
KRT6AP02538 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 TP73-203ENST00000357733 4899 ntTSL 5 BASIC13.61□□□□□ -0.23
KRT6AP02538 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
KRT6AP02538 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 AC004241.5-201ENST00000623870 2448 ntBASIC13.61□□□□□ -0.23
KRT6AP02538 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC13.61□□□□□ -0.23
KRT6AP02538 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
KRT6AP02538 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.61□□□□□ -0.23
KRT6AP02538 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.61□□□□□ -0.23
KRT6AP02538 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KRT6AP02538 NUTM2HP-201ENST00000442076 2498 ntBASIC13.61□□□□□ -0.23
KRT6AP02538 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 AC005014.1-201ENST00000432006 2976 ntBASIC13.6□□□□□ -0.23
KRT6AP02538 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 AL355102.3-201ENST00000554299 1678 ntBASIC13.6□□□□□ -0.23
KRT6AP02538 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
KRT6AP02538 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.6□□□□□ -0.23
KRT6AP02538 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
KRT6AP02538 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
KRT6AP02538 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.6□□□□□ -0.23
KRT6AP02538 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
KRT6AP02538 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.6□□□□□ -0.23
KRT6AP02538 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.6□□□□□ -0.23
KRT6AP02538 AC136604.1-202ENST00000425471 771 ntBASIC13.6□□□□□ -0.23
KRT6AP02538 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms