Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 AC026320.2-201ENST00000434379 478 ntBASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 AC242376.1-201ENST00000559033 726 ntBASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 AC026803.1-201ENST00000569130 274 ntBASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 AL021707.6-201ENST00000609212 491 ntBASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 AL353770.1-201ENST00000614915 403 ntBASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 TMEM14EP-202ENST00000639378 1296 ntBASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 AC089987.1-201ENST00000551654 2209 ntBASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 FAM90A12P-201ENST00000519497 2375 ntBASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 FAM90A24P-201ENST00000520792 2369 ntBASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 CICP8-201ENST00000455800 2813 ntBASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 AC061965.1-201ENST00000560524 1465 ntBASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 AC006987.1-201ENST00000413610 527 ntBASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 RN7SL8P-201ENST00000461771 266 ntBASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 AC008723.1-201ENST00000506922 207 ntBASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 AC073352.2-201ENST00000609385 439 ntBASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 AC103691.2-201ENST00000618824 433 ntBASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 AC007718.1-201ENST00000621078 280 ntBASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 AL591122.2-201ENST00000624125 1853 ntBASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 AL034417.3-201ENST00000641100 1043 ntBASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CUEDC1Q9NWM3 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 CAP2P1-201ENST00000557743 1390 ntBASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms