Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE5Q9HCH3 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
CPNE5Q9HCH3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE5Q9HCH3 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE5Q9HCH3 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.62□□□□□ -0.23
CPNE5Q9HCH3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CPNE5Q9HCH3 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE5Q9HCH3 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE5Q9HCH3 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE5Q9HCH3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE5Q9HCH3 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE5Q9HCH3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE5Q9HCH3 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.62□□□□□ -0.23
CPNE5Q9HCH3 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE5Q9HCH3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE5Q9HCH3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.62□□□□□ -0.23
CPNE5Q9HCH3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE5Q9HCH3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CPNE5Q9HCH3 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE5Q9HCH3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE5Q9HCH3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CPNE5Q9HCH3 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 RN7SKP109-201ENST00000410592 316 ntBASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 KRT18P36-201ENST00000411618 1276 ntBASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 ACTBP7-201ENST00000418351 1124 ntBASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 AQP7P5-201ENST00000428759 1049 ntBASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 AQP7P4-201ENST00000447083 1042 ntBASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 AQP7P2-201ENST00000453967 1041 ntBASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 AC055811.3-201ENST00000584952 686 ntBASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 AQP7P3-201ENST00000624547 1041 ntBASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 AL118506.1-201ENST00000601296 3082 ntBASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 KRT8P24-201ENST00000560290 1559 ntBASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE5Q9HCH3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.6□□□□□ -0.23
CPNE5Q9HCH3 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE5Q9HCH3 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE5Q9HCH3 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE5Q9HCH3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE5Q9HCH3 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE5Q9HCH3 AC018529.2-202ENST00000611482 3087 ntBASIC13.6□□□□□ -0.23
CPNE5Q9HCH3 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE5Q9HCH3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE5Q9HCH3 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE5Q9HCH3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.6□□□□□ -0.23
CPNE5Q9HCH3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE5Q9HCH3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE5Q9HCH3 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
CPNE5Q9HCH3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CPNE5Q9HCH3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE5Q9HCH3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CPNE5Q9HCH3 COX20P1-201ENST00000366529 357 ntBASIC13.6□□□□□ -0.23
CPNE5Q9HCH3 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CPNE5Q9HCH3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE5Q9HCH3 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms