Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 HINT1-205ENST00000508488 703 ntTSL 2 BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 KRT8P2-201ENST00000556193 944 ntBASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 AC132825.4-202ENST00000578792 434 ntBASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 RN7SL357P-201ENST00000581065 298 ntBASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 BX640514.1-201ENST00000583223 1918 ntBASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 AL139158.3-201ENST00000641212 1562 ntBASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 ODCP-201ENST00000459650 1639 ntBASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 RPL35P9-201ENST00000446059 350 ntBASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 CTBP2P4-201ENST00000513884 920 ntBASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 AL132780.4-201ENST00000624870 1135 ntBASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.96□□□□□ -0.33
H3F3CQ6NXT2 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H3F3CQ6NXT2 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.96□□□□□ -0.34
H3F3CQ6NXT2 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
H3F3CQ6NXT2 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H3F3CQ6NXT2 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.96□□□□□ -0.34
H3F3CQ6NXT2 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H3F3CQ6NXT2 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.34
H3F3CQ6NXT2 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
H3F3CQ6NXT2 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H3F3CQ6NXT2 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.96□□□□□ -0.34
H3F3CQ6NXT2 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.96□□□□□ -0.34
H3F3CQ6NXT2 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
H3F3CQ6NXT2 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
H3F3CQ6NXT2 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H3F3CQ6NXT2 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.96□□□□□ -0.34
H3F3CQ6NXT2 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
H3F3CQ6NXT2 MSANTD2P1-201ENST00000445341 1368 ntBASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC12.95□□□□□ -0.34
H3F3CQ6NXT2 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms