Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
AP1S1P61966 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
AP1S1P61966 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.04□□□□□ -0.16
AP1S1P61966 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
AP1S1P61966 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S1P61966 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S1P61966 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
AP1S1P61966 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S1P61966 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S1P61966 AL031595.1-201ENST00000623969 4709 ntBASIC14.03□□□□□ -0.16
AP1S1P61966 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S1P61966 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.03□□□□□ -0.16
AP1S1P61966 FAM90A12P-201ENST00000519497 2375 ntBASIC14.03□□□□□ -0.16
AP1S1P61966 FAM90A24P-201ENST00000520792 2369 ntBASIC14.03□□□□□ -0.16
AP1S1P61966 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S1P61966 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.03□□□□□ -0.16
AP1S1P61966 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S1P61966 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S1P61966 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S1P61966 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S1P61966 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S1P61966 AC106827.1-201ENST00000366454 431 ntBASIC14.03□□□□□ -0.16
AP1S1P61966 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.03□□□□□ -0.16
AP1S1P61966 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
AP1S1P61966 MPV17-204ENST00000399052 749 ntTSL 4 BASIC14.03□□□□□ -0.16
AP1S1P61966 GGTLC4P-201ENST00000402176 664 ntBASIC14.03□□□□□ -0.16
AP1S1P61966 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S1P61966 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC14.03□□□□□ -0.16
AP1S1P61966 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
AP1S1P61966 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.03□□□□□ -0.16
AP1S1P61966 PRSS3P1-201ENST00000503996 742 ntBASIC14.03□□□□□ -0.16
AP1S1P61966 AP002803.1-201ENST00000528836 498 ntBASIC14.03□□□□□ -0.16
AP1S1P61966 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
AP1S1P61966 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.03□□□□□ -0.16
AP1S1P61966 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC14.03□□□□□ -0.16
AP1S1P61966 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14.03□□□□□ -0.16
AP1S1P61966 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.03□□□□□ -0.16
AP1S1P61966 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.03□□□□□ -0.16
AP1S1P61966 AC025262.2-201ENST00000623975 1056 ntBASIC14.03□□□□□ -0.16
AP1S1P61966 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC14.03□□□□□ -0.16
AP1S1P61966 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S1P61966 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC14.03□□□□□ -0.16
AP1S1P61966 AC009474.1-201ENST00000455096 1565 ntBASIC14.03□□□□□ -0.16
AP1S1P61966 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S1P61966 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S1P61966 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
AP1S1P61966 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S1P61966 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S1P61966 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S1P61966 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S1P61966 AL122018.1-201ENST00000446607 2310 ntBASIC14.03□□□□□ -0.16
AP1S1P61966 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S1P61966 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.03□□□□□ -0.16
AP1S1P61966 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.03□□□□□ -0.16
AP1S1P61966 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.03□□□□□ -0.16
AP1S1P61966 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
AP1S1P61966 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
AP1S1P61966 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
AP1S1P61966 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
AP1S1P61966 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP1S1P61966 AC020763.3-201ENST00000625095 2904 ntBASIC14.02□□□□□ -0.16
AP1S1P61966 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP1S1P61966 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP1S1P61966 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
AP1S1P61966 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP1S1P61966 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP1S1P61966 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
AP1S1P61966 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
AP1S1P61966 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC14.02□□□□□ -0.16
AP1S1P61966 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP1S1P61966 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP1S1P61966 AC040160.2-201ENST00000623816 1675 ntBASIC14.02□□□□□ -0.16
AP1S1P61966 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP1S1P61966 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC14.02□□□□□ -0.16
AP1S1P61966 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14.02□□□□□ -0.16
AP1S1P61966 AC131212.3-201ENST00000624087 4219 ntBASIC14.02□□□□□ -0.16
AP1S1P61966 AL358781.1-202ENST00000321081 1360 ntBASIC14.02□□□□□ -0.17
AP1S1P61966 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP1S1P61966 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP1S1P61966 RNVU1-8-201ENST00000364272 125 ntBASIC14.02□□□□□ -0.17
AP1S1P61966 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP1S1P61966 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC14.02□□□□□ -0.17
AP1S1P61966 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.02□□□□□ -0.17
AP1S1P61966 AC078991.1-201ENST00000437297 610 ntBASIC14.02□□□□□ -0.17
AP1S1P61966 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.02□□□□□ -0.17
AP1S1P61966 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC14.02□□□□□ -0.17
AP1S1P61966 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.02□□□□□ -0.17
AP1S1P61966 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.02□□□□□ -0.17
AP1S1P61966 RNA5SP417-201ENST00000516459 108 ntBASIC14.02□□□□□ -0.17
AP1S1P61966 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC14.02□□□□□ -0.17
AP1S1P61966 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.02□□□□□ -0.17
AP1S1P61966 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC14.02□□□□□ -0.17
AP1S1P61966 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC14.02□□□□□ -0.17
AP1S1P61966 AC140113.1-201ENST00000603467 169 ntBASIC14.02□□□□□ -0.17
AP1S1P61966 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms