Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.17□□□□□ -0.3
CHMP24386 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.17□□□□□ -0.3
CHMP24386 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.17□□□□□ -0.3
CHMP24386 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CHMP24386 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.17□□□□□ -0.3
CHMP24386 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CHMP24386 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CHMP24386 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.17□□□□□ -0.3
CHMP24386 AC125807.2-201ENST00000513358 3514 ntBASIC13.17□□□□□ -0.3
CHMP24386 AL359845.1-201ENST00000458202 1648 ntBASIC13.17□□□□□ -0.3
CHMP24386 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.17□□□□□ -0.3
CHMP24386 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.17□□□□□ -0.3
CHMP24386 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.17□□□□□ -0.3
CHMP24386 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHMP24386 MKRN5P-201ENST00000445263 1467 ntBASIC13.16□□□□□ -0.3
CHMP24386 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 AHCYP4-201ENST00000419201 1315 ntBASIC13.16□□□□□ -0.3
CHMP24386 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CHMP24386 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CHMP24386 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.16□□□□□ -0.3
CHMP24386 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.16□□□□□ -0.3
CHMP24386 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.16□□□□□ -0.3
CHMP24386 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CHMP24386 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.16□□□□□ -0.3
CHMP24386 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.16□□□□□ -0.3
CHMP24386 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 AC078875.1-201ENST00000431907 724 ntBASIC13.16□□□□□ -0.3
CHMP24386 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.16□□□□□ -0.3
CHMP24386 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.16□□□□□ -0.3
CHMP24386 AL805961.1-203ENST00000641078 1258 ntBASIC13.16□□□□□ -0.3
CHMP24386 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.16□□□□□ -0.3
CHMP24386 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.16□□□□□ -0.3
CHMP24386 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.16□□□□□ -0.3
CHMP24386 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CHMP24386 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CHMP24386 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP24386 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC13.16□□□□□ -0.3
CHMP24386 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.16□□□□□ -0.3
CHMP24386 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 PCDHA5-203ENST00000614258 4248 ntBASIC13.15□□□□□ -0.3
CHMP24386 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CHMP24386 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.15□□□□□ -0.3
CHMP24386 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CHMP24386 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.15□□□□□ -0.3
CHMP24386 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 RN7SKP214-201ENST00000364208 315 ntBASIC13.15□□□□□ -0.3
CHMP24386 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.15□□□□□ -0.3
CHMP24386 SLC25A24P2-201ENST00000415059 510 ntBASIC13.15□□□□□ -0.3
CHMP24386 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.15□□□□□ -0.3
CHMP24386 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.15□□□□□ -0.3
CHMP24386 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CHMP24386 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.15□□□□□ -0.3
CHMP24386 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.15□□□□□ -0.3
CHMP24386 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.15□□□□□ -0.3
CHMP24386 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.15□□□□□ -0.3
CHMP24386 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.15□□□□□ -0.3
CHMP24386 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP24386 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms