Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
GAPDHP04406 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
GAPDHP04406 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
GAPDHP04406 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
GAPDHP04406 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC11.79□□□□□ -0.52
GAPDHP04406 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
GAPDHP04406 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
GAPDHP04406 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
GAPDHP04406 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
GAPDHP04406 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.79□□□□□ -0.52
GAPDHP04406 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
GAPDHP04406 KRT8P29-201ENST00000420409 1371 ntBASIC11.79□□□□□ -0.52
GAPDHP04406 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
GAPDHP04406 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC11.79□□□□□ -0.52
GAPDHP04406 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
GAPDHP04406 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
GAPDHP04406 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC11.78□□□□□ -0.52
GAPDHP04406 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 FP325330.2-201ENST00000624219 5630 ntBASIC11.78□□□□□ -0.52
GAPDHP04406 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC11.78□□□□□ -0.52
GAPDHP04406 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 STRCP1-201ENST00000509801 5328 ntBASIC11.78□□□□□ -0.52
GAPDHP04406 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC11.78□□□□□ -0.52
GAPDHP04406 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC11.78□□□□□ -0.52
GAPDHP04406 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
GAPDHP04406 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC11.78□□□□□ -0.52
GAPDHP04406 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC11.78□□□□□ -0.52
GAPDHP04406 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC11.78□□□□□ -0.52
GAPDHP04406 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC11.78□□□□□ -0.52
GAPDHP04406 RPL13AP20-201ENST00000459725 609 ntBASIC11.78□□□□□ -0.52
GAPDHP04406 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
GAPDHP04406 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC11.78□□□□□ -0.52
GAPDHP04406 USB1-203ENST00000539737 1212 ntTSL 2 BASIC11.78□□□□□ -0.52
GAPDHP04406 AL583810.1-201ENST00000553344 1045 ntBASIC11.78□□□□□ -0.52
GAPDHP04406 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC11.78□□□□□ -0.52
GAPDHP04406 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC11.78□□□□□ -0.52
GAPDHP04406 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC11.78□□□□□ -0.52
GAPDHP04406 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
GAPDHP04406 AC021016.3-201ENST00000608367 477 ntBASIC11.78□□□□□ -0.52
GAPDHP04406 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 RPL35-206ENST00000629845 340 ntTSL 5 BASIC11.78□□□□□ -0.52
GAPDHP04406 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC11.78□□□□□ -0.52
GAPDHP04406 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC11.78□□□□□ -0.52
GAPDHP04406 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
GAPDHP04406 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC11.78□□□□□ -0.52
GAPDHP04406 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC11.78□□□□□ -0.52
GAPDHP04406 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC11.78□□□□□ -0.52
GAPDHP04406 AC110048.1-201ENST00000604293 2157 ntBASIC11.78□□□□□ -0.52
GAPDHP04406 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
GAPDHP04406 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC11.78□□□□□ -0.52
GAPDHP04406 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC11.78□□□□□ -0.52
GAPDHP04406 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC11.78□□□□□ -0.52
GAPDHP04406 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GAPDHP04406 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.78□□□□□ -0.52
GAPDHP04406 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC11.77□□□□□ -0.52
GAPDHP04406 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC11.77□□□□□ -0.52
GAPDHP04406 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
GAPDHP04406 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
GAPDHP04406 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
GAPDHP04406 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
GAPDHP04406 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
GAPDHP04406 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
GAPDHP04406 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC11.77□□□□□ -0.53
GAPDHP04406 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
GAPDHP04406 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
GAPDHP04406 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
GAPDHP04406 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
GAPDHP04406 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
GAPDHP04406 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
GAPDHP04406 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
GAPDHP04406 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
GAPDHP04406 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
GAPDHP04406 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
GAPDHP04406 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
GAPDHP04406 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
GAPDHP04406 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms