Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 VDAC1P7-201ENST00000462417 847 ntBASIC11.09□□□□□ -0.63
IFNA1P01562 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC11.09□□□□□ -0.63
IFNA1P01562 HLA-V-204ENST00000476601 1289 ntBASIC11.09□□□□□ -0.63
IFNA1P01562 FAM86LP-201ENST00000478302 853 ntBASIC11.09□□□□□ -0.63
IFNA1P01562 KRT18P56-201ENST00000507275 550 ntBASIC11.09□□□□□ -0.63
IFNA1P01562 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
IFNA1P01562 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC11.09□□□□□ -0.63
IFNA1P01562 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC11.09□□□□□ -0.63
IFNA1P01562 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC11.09□□□□□ -0.63
IFNA1P01562 AC092337.1-201ENST00000568699 1129 ntBASIC11.09□□□□□ -0.63
IFNA1P01562 COX5A-206ENST00000568783 571 ntTSL 3 BASIC11.09□□□□□ -0.63
IFNA1P01562 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC11.09□□□□□ -0.63
IFNA1P01562 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC11.09□□□□□ -0.63
IFNA1P01562 ABBA01031660.1-201ENST00000635219 756 ntBASIC11.09□□□□□ -0.63
IFNA1P01562 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 PAK5-203ENST00000378429 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC11.09□□□□□ -0.63
IFNA1P01562 TUB-202ENST00000305253 6420 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
IFNA1P01562 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC11.09□□□□□ -0.63
IFNA1P01562 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC11.09□□□□□ -0.63
IFNA1P01562 MYT1-203ENST00000536311 5614 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
IFNA1P01562 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
IFNA1P01562 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
IFNA1P01562 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
IFNA1P01562 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC11.08□□□□□ -0.63
IFNA1P01562 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.63
IFNA1P01562 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
IFNA1P01562 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC11.08□□□□□ -0.64
IFNA1P01562 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC11.08□□□□□ -0.64
IFNA1P01562 DCT-201ENST00000377028 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 GNG7-201ENST00000382159 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 BDP1-201ENST00000358731 11073 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC11.08□□□□□ -0.64
IFNA1P01562 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 DAPK2-213ENST00000612884 8086 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
IFNA1P01562 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 PTPN4-201ENST00000263708 10300 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
IFNA1P01562 KLF2P2-201ENST00000416807 1039 ntBASIC11.08□□□□□ -0.64
IFNA1P01562 FAM58DP-201ENST00000428076 619 ntBASIC11.08□□□□□ -0.64
IFNA1P01562 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC11.08□□□□□ -0.64
IFNA1P01562 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC11.08□□□□□ -0.64
IFNA1P01562 RPL13AP23-201ENST00000480739 586 ntBASIC11.08□□□□□ -0.64
IFNA1P01562 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC11.08□□□□□ -0.64
IFNA1P01562 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC11.08□□□□□ -0.64
IFNA1P01562 AC092865.5-201ENST00000545435 363 ntBASIC11.08□□□□□ -0.64
IFNA1P01562 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC11.08□□□□□ -0.64
IFNA1P01562 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC11.08□□□□□ -0.64
IFNA1P01562 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC11.08□□□□□ -0.64
IFNA1P01562 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC11.08□□□□□ -0.64
IFNA1P01562 SUN2-202ENST00000405510 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
IFNA1P01562 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC11.08□□□□□ -0.64
IFNA1P01562 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC11.08□□□□□ -0.64
IFNA1P01562 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC11.08□□□□□ -0.64
IFNA1P01562 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC11.08□□□□□ -0.64
IFNA1P01562 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
IFNA1P01562 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
IFNA1P01562 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
IFNA1P01562 LAMB1-204ENST00000393561 5766 ntTSL 5 BASIC11.08□□□□□ -0.64
IFNA1P01562 AMACR-201ENST00000335606 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
IFNA1P01562 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC11.08□□□□□ -0.64
IFNA1P01562 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC11.08□□□□□ -0.64
IFNA1P01562 UBASH3B-201ENST00000284273 6912 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC11.07□□□□□ -0.64
IFNA1P01562 BCL2L11-223ENST00000622612 4995 ntTSL 5 BASIC11.07□□□□□ -0.64
IFNA1P01562 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms