Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 AC100827.2-201ENST00000563214 1194 ntBASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 AC103810.3-201ENST00000583567 96 ntBASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 COX11-210ENST00000639671 696 ntBASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CHAMP1Q96JM3 AMT-221ENST00000538581 2038 ntTSL 2 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 VDAC1P1-201ENST00000439229 848 ntBASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 RPL7P3-201ENST00000441388 714 ntBASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 SNX29P1-201ENST00000548357 1007 ntBASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 MIR4259-201ENST00000584466 101 ntBASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHAMP1Q96JM3 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms