Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 MIR4326-201ENST00000582203 59 ntBASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 AC073150.1-201ENST00000450406 1084 ntBASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 AC026803.1-201ENST00000569130 274 ntBASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 PES1P2-201ENST00000449745 1735 ntBASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 AC019294.4-201ENST00000561777 2905 ntBASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 AC040160.2-201ENST00000623816 1675 ntBASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PDLIM5Q96HC4 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 DUTP3-201ENST00000450025 415 ntBASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 SPTLC1P5-201ENST00000450718 252 ntBASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 AC008723.1-201ENST00000506922 207 ntBASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.62□□□□□ -0.23
PDLIM5Q96HC4 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms