Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 PCDHA6-201ENST00000378126 3267 ntBASIC12.21□□□□□ -0.45
CCDC107Q8WV48 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 AC026271.4-201ENST00000578214 1833 ntBASIC12.21□□□□□ -0.45
CCDC107Q8WV48 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 VENTXP1-201ENST00000569334 2716 ntBASIC12.21□□□□□ -0.45
CCDC107Q8WV48 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 AC060814.4-201ENST00000594169 2163 ntBASIC12.21□□□□□ -0.45
CCDC107Q8WV48 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 AC092933.1-201ENST00000393644 945 ntBASIC12.21□□□□□ -0.45
CCDC107Q8WV48 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 AC016694.1-201ENST00000434179 700 ntBASIC12.21□□□□□ -0.45
CCDC107Q8WV48 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 AC015936.2-201ENST00000593177 259 ntBASIC12.21□□□□□ -0.45
CCDC107Q8WV48 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.21□□□□□ -0.45
CCDC107Q8WV48 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 AC138951.2-201ENST00000623455 1161 ntBASIC12.21□□□□□ -0.45
CCDC107Q8WV48 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.21□□□□□ -0.45
CCDC107Q8WV48 LINC01165-201ENST00000445190 1623 ntBASIC12.21□□□□□ -0.46
CCDC107Q8WV48 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC107Q8WV48 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.46
CCDC107Q8WV48 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC107Q8WV48 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.21□□□□□ -0.46
CCDC107Q8WV48 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CCDC107Q8WV48 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC107Q8WV48 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC107Q8WV48 GHET1-201ENST00000627071 1906 ntBASIC12.21□□□□□ -0.46
CCDC107Q8WV48 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC107Q8WV48 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.21□□□□□ -0.46
CCDC107Q8WV48 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC107Q8WV48 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC107Q8WV48 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
CCDC107Q8WV48 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.2□□□□□ -0.46
CCDC107Q8WV48 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 USP32P1-208ENST00000506594 1164 ntBASIC12.2□□□□□ -0.46
CCDC107Q8WV48 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 COX5BP1-201ENST00000507622 393 ntBASIC12.2□□□□□ -0.46
CCDC107Q8WV48 ALG3P1-201ENST00000508806 1114 ntBASIC12.2□□□□□ -0.46
CCDC107Q8WV48 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms