RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 DCAF8L2P0C7V8 631 aa22.91■■□□□ 1.26
AC006001.3-201ENST00000449307 SUPT5HO00267 1087 aaKnown RBP20.94■□□□□ 0.94
AC006001.3-201ENST00000449307 EHMT2Q96KQ7 1210 aa20.91■□□□□ 0.94
AC006001.3-201ENST00000449307 SHROOM4Q9ULL8 1493 aa20.63■□□□□ 0.89
AC006001.3-201ENST00000449307 FAM9AQ8IZU1 332 aaPredicted RBP20.48■□□□□ 0.87
AC006001.3-201ENST00000449307 APLP2Q06481 763 aa20.32■□□□□ 0.84
AC006001.3-201ENST00000449307 NISCHQ9Y2I1 1504 aa20.09■□□□□ 0.81
AC006001.3-201ENST00000449307 RANGAP1P46060 587 aaPredicted RBP20.09■□□□□ 0.81
AC006001.3-201ENST00000449307 TTBK1Q5TCY1 1321 aaPredicted RBP20.08■□□□□ 0.81
AC006001.3-201ENST00000449307 ATP1B4Q9UN42 357 aaPredicted RBP20.04■□□□□ 0.8
AC006001.3-201ENST00000449307 PELP1Q8IZL8 1130 aaKnown RBP19.81■□□□□ 0.76
AC006001.3-201ENST00000449307 MYT1LQ9UL68 1186 aa19.65■□□□□ 0.74
AC006001.3-201ENST00000449307 CHIC1Q5VXU3 224 aa19.4■□□□□ 0.7
AC006001.3-201ENST00000449307 PCGF6Q9BYE7 350 aa19.39■□□□□ 0.69
AC006001.3-201ENST00000449307 UBTFP17480 764 aaKnown RBP19.39■□□□□ 0.69
AC006001.3-201ENST00000449307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.35■□□□□ 0.69
AC006001.3-201ENST00000449307 HNRNPUL2Q1KMD3 747 aaKnown RBP19.35■□□□□ 0.69
AC006001.3-201ENST00000449307 TRIM41Q8WV44 630 aa19.3■□□□□ 0.68
AC006001.3-201ENST00000449307 ERICH6Q7L0X2 663 aa19.22■□□□□ 0.67
AC006001.3-201ENST00000449307 CCER1Q8TC90 406 aaPredicted RBP19.12■□□□□ 0.65
AC006001.3-201ENST00000449307 POLR3GLQ9BT43 218 aa19.07■□□□□ 0.64
AC006001.3-201ENST00000449307 SLC4A1APQ9BWU0 796 aaKnown RBP19.02■□□□□ 0.63
AC006001.3-201ENST00000449307 ITGAEP38570 1179 aa18.95■□□□□ 0.62
AC006001.3-201ENST00000449307 PPARGC1BQ86YN6 1023 aaKnown RBP18.93■□□□□ 0.62
AC006001.3-201ENST00000449307 CNGB1Q14028 1251 aaPredicted RBP18.89■□□□□ 0.61
AC006001.3-201ENST00000449307 NEFLP07196 543 aa18.82■□□□□ 0.6
AC006001.3-201ENST00000449307 YTHDC1Q96MU7 727 aaKnown RBP18.78■□□□□ 0.6
AC006001.3-201ENST00000449307 CENPBP07199 599 aaPredicted RBP18.77■□□□□ 0.6
AC006001.3-201ENST00000449307 FBLN2P98095 1184 aa18.64■□□□□ 0.58
AC006001.3-201ENST00000449307 ZEB1P37275 1124 aaPredicted RBP18.61■□□□□ 0.57
AC006001.3-201ENST00000449307 PABPN1Q86U42 306 aaKnown RBP eCLIP18.58■□□□□ 0.57
AC006001.3-201ENST00000449307 BCANQ96GW7 911 aa18.57■□□□□ 0.56
AC006001.3-201ENST00000449307 DAXXQ9UER7 740 aaPredicted RBP18.57■□□□□ 0.56
AC006001.3-201ENST00000449307 SLC24A1O60721 1099 aa18.5■□□□□ 0.55
AC006001.3-201ENST00000449307 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
AC006001.3-201ENST00000449307 ABCC9O60706 1549 aa18.42■□□□□ 0.54
AC006001.3-201ENST00000449307 FAM50AQ14320 339 aaKnown RBP18.38■□□□□ 0.53
AC006001.3-201ENST00000449307 TRIM52Q96A61 297 aa18.38■□□□□ 0.53
AC006001.3-201ENST00000449307 CLSPNQ9HAW4 1339 aa18.29■□□□□ 0.52
AC006001.3-201ENST00000449307 MYT1Q01538 1121 aa18.27■□□□□ 0.51
AC006001.3-201ENST00000449307 ESF1Q9H501 851 aaKnown RBP18.25■□□□□ 0.51
AC006001.3-201ENST00000449307 BCL11AQ9H165 835 aa18.24■□□□□ 0.51
AC006001.3-201ENST00000449307 ZNF326Q5BKZ1 582 aaKnown RBP18.24■□□□□ 0.51
AC006001.3-201ENST00000449307 ARID3CA6NKF2 412 aa18.23■□□□□ 0.51
AC006001.3-201ENST00000449307 NEUROD1Q13562 356 aa18.11■□□□□ 0.49
AC006001.3-201ENST00000449307 ZBTB47Q9UFB7 747 aaPredicted RBP18.11■□□□□ 0.49
AC006001.3-201ENST00000449307 ZNF316A6NFI3 1004 aaPredicted RBP18.08■□□□□ 0.49
AC006001.3-201ENST00000449307 LOC105371045A0A1W2PR82 267 aa18.08■□□□□ 0.49
AC006001.3-201ENST00000449307 STAG3Q9UJ98 1225 aa18.06■□□□□ 0.48
AC006001.3-201ENST00000449307 TRIM26Q12899 539 aaPredicted RBP18.06■□□□□ 0.48
AC006001.3-201ENST00000449307 ZNF777Q9ULD5 760 aaPredicted RBP18.02■□□□□ 0.48
AC006001.3-201ENST00000449307 P3H3Q8IVL6 736 aa18■□□□□ 0.47
AC006001.3-201ENST00000449307 NEFMP07197 916 aa18■□□□□ 0.47
AC006001.3-201ENST00000449307 NPM1P06748 294 aaKnown RBP eCLIP18■□□□□ 0.47
AC006001.3-201ENST00000449307 SCAF1Q9H7N4 1312 aaKnown RBP17.97■□□□□ 0.47
AC006001.3-201ENST00000449307 CHGAP10645 457 aaKnown RBP17.97■□□□□ 0.47
AC006001.3-201ENST00000449307 A0A0G2JS52 829 aa17.93■□□□□ 0.46
AC006001.3-201ENST00000449307 CANXP27824 592 aaKnown RBP17.91■□□□□ 0.46
AC006001.3-201ENST00000449307 PLEKHG5O94827 1062 aa17.82■□□□□ 0.44
AC006001.3-201ENST00000449307 HRCP23327 699 aa17.72■□□□□ 0.43
AC006001.3-201ENST00000449307 SENP3Q9H4L4 574 aaPredicted RBP17.72■□□□□ 0.43
AC006001.3-201ENST00000449307 ZBTB7CA1YPR0 619 aa17.71■□□□□ 0.43
AC006001.3-201ENST00000449307 RTL5Q5HYW3 569 aaPredicted RBP17.7■□□□□ 0.42
AC006001.3-201ENST00000449307 CDK11AQ9UQ88 783 aaPredicted RBP17.69■□□□□ 0.42
AC006001.3-201ENST00000449307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.65■□□□□ 0.42
AC006001.3-201ENST00000449307 ANP32CO43423 234 aa17.65■□□□□ 0.42
AC006001.3-201ENST00000449307 C14orf37Q86TY3 774 aa17.63■□□□□ 0.41
AC006001.3-201ENST00000449307 ARID4BQ4LE39 1312 aaPredicted RBP17.58■□□□□ 0.4
AC006001.3-201ENST00000449307 HAP1P54257 671 aaPredicted RBP17.57■□□□□ 0.4
AC006001.3-201ENST00000449307 DIEXFQ68CQ4 756 aaKnown RBP17.53■□□□□ 0.4
AC006001.3-201ENST00000449307 NPM2Q86SE8 214 aaKnown RBP17.51■□□□□ 0.39
AC006001.3-201ENST00000449307 CHMP7Q8WUX9 453 aaPredicted RBP17.5■□□□□ 0.39
AC006001.3-201ENST00000449307 TRHP20396 242 aaPredicted RBP17.48■□□□□ 0.39
AC006001.3-201ENST00000449307 PPP1R15AO75807 674 aaPredicted RBP17.46■□□□□ 0.39
AC006001.3-201ENST00000449307 KCNH8Q96L42 1107 aa17.43■□□□□ 0.38
AC006001.3-201ENST00000449307 ARXQ96QS3 562 aa17.4■□□□□ 0.38
AC006001.3-201ENST00000449307 CHIC2Q9UKJ5 165 aa17.38■□□□□ 0.37
AC006001.3-201ENST00000449307 SCRIBQ14160 1630 aa17.36■□□□□ 0.37
AC006001.3-201ENST00000449307 SALL2Q9Y467 1007 aaPredicted RBP17.35■□□□□ 0.37
AC006001.3-201ENST00000449307 KDM2AQ9Y2K7 1162 aa17.34■□□□□ 0.37
AC006001.3-201ENST00000449307 HSP90AA1P07900 732 aaKnown RBP17.32■□□□□ 0.36
AC006001.3-201ENST00000449307 TSPY4P0CV99 314 aa17.29■□□□□ 0.36
AC006001.3-201ENST00000449307 TSPY10P0CW01 314 aa17.29■□□□□ 0.36
AC006001.3-201ENST00000449307 LMOD2Q6P5Q4 547 aa17.29■□□□□ 0.36
AC006001.3-201ENST00000449307 CSRNP3Q8WYN3 585 aa17.28■□□□□ 0.36
AC006001.3-201ENST00000449307 NPHP1O15259 732 aa17.28■□□□□ 0.36
AC006001.3-201ENST00000449307 TULP1O00294 542 aaPredicted RBP17.22■□□□□ 0.35
AC006001.3-201ENST00000449307 TONSLQ96HA7 1378 aa17.22■□□□□ 0.35
AC006001.3-201ENST00000449307 WDR43Q15061 677 aaKnown RBP eCLIP17.18■□□□□ 0.34
AC006001.3-201ENST00000449307 CDK11BP21127 795 aaKnown RBP17.18■□□□□ 0.34
AC006001.3-201ENST00000449307 ERCC6Q03468 1493 aa17.18■□□□□ 0.34
AC006001.3-201ENST00000449307 TMC1Q8TDI8 760 aa17.16■□□□□ 0.34
AC006001.3-201ENST00000449307 FAM9BQ8IZU0 186 aa17.15■□□□□ 0.34
AC006001.3-201ENST00000449307 UPF2Q9HAU5 1272 aaKnown RBP17.11■□□□□ 0.33
AC006001.3-201ENST00000449307 PPM1GO15355 546 aaPredicted RBP17.11■□□□□ 0.33
AC006001.3-201ENST00000449307 MLECQ14165 292 aa17.1■□□□□ 0.33
AC006001.3-201ENST00000449307 ANP32AP39687 249 aaKnown RBP17.09■□□□□ 0.33
AC006001.3-201ENST00000449307 ANP32BQ92688 251 aaKnown RBP17.09■□□□□ 0.33
AC006001.3-201ENST00000449307 MYH16Q9H6N6 1097 aa17.08■□□□□ 0.32
AC006001.3-201ENST00000449307 MTUS2Q5JR59 1369 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms