Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC14.8□□□□□ -0.04
BRCC3P46736 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC14.8□□□□□ -0.04
BRCC3P46736 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC14.8□□□□□ -0.04
BRCC3P46736 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
BRCC3P46736 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC14.8□□□□□ -0.04
BRCC3P46736 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC14.8□□□□□ -0.04
BRCC3P46736 AC073592.2-201ENST00000623062 780 ntBASIC14.8□□□□□ -0.04
BRCC3P46736 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
BRCC3P46736 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.8□□□□□ -0.04
BRCC3P46736 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 AC073869.1-201ENST00000415574 2762 ntBASIC14.8□□□□□ -0.04
BRCC3P46736 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.8□□□□□ -0.04
BRCC3P46736 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.8□□□□□ -0.04
BRCC3P46736 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
BRCC3P46736 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC14.8□□□□□ -0.04
BRCC3P46736 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
BRCC3P46736 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRCC3P46736 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
BRCC3P46736 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCC3P46736 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
BRCC3P46736 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
BRCC3P46736 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCC3P46736 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCC3P46736 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCC3P46736 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
BRCC3P46736 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCC3P46736 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BRCC3P46736 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCC3P46736 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCC3P46736 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.79□□□□□ -0.04
BRCC3P46736 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCC3P46736 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCC3P46736 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BRCC3P46736 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
BRCC3P46736 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
BRCC3P46736 LINP1-201ENST00000417112 917 ntTSL 2 BASIC14.79□□□□□ -0.04
BRCC3P46736 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BRCC3P46736 BCAS2P2-201ENST00000425064 674 ntBASIC14.79□□□□□ -0.04
BRCC3P46736 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.79□□□□□ -0.04
BRCC3P46736 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCC3P46736 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC14.79□□□□□ -0.04
BRCC3P46736 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
BRCC3P46736 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC14.79□□□□□ -0.04
BRCC3P46736 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC14.79□□□□□ -0.04
BRCC3P46736 RN7SL582P-201ENST00000491078 279 ntBASIC14.79□□□□□ -0.04
BRCC3P46736 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCC3P46736 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC14.79□□□□□ -0.04
BRCC3P46736 AC089987.1-201ENST00000551654 2209 ntBASIC14.79□□□□□ -0.04
BRCC3P46736 FOXN3-AS2-201ENST00000554071 1262 ntBASIC14.79□□□□□ -0.04
BRCC3P46736 MT3-202ENST00000561640 514 ntTSL 3 BASIC14.79□□□□□ -0.04
BRCC3P46736 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
BRCC3P46736 AC008972.2-201ENST00000606587 494 ntBASIC14.79□□□□□ -0.04
BRCC3P46736 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC14.79□□□□□ -0.04
BRCC3P46736 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
BRCC3P46736 AC002472.4-201ENST00000641915 272 ntBASIC14.79□□□□□ -0.04
BRCC3P46736 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCC3P46736 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCC3P46736 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
BRCC3P46736 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCC3P46736 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
BRCC3P46736 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCC3P46736 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BRCC3P46736 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.78□□□□□ -0.04
BRCC3P46736 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCC3P46736 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCC3P46736 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCC3P46736 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCC3P46736 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC14.78□□□□□ -0.04
BRCC3P46736 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.78□□□□□ -0.04
BRCC3P46736 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC14.78□□□□□ -0.04
BRCC3P46736 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.78□□□□□ -0.04
BRCC3P46736 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.78□□□□□ -0.04
BRCC3P46736 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.78□□□□□ -0.04
BRCC3P46736 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.78□□□□□ -0.04
BRCC3P46736 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCC3P46736 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCC3P46736 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC14.78□□□□□ -0.04
BRCC3P46736 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC14.78□□□□□ -0.04
BRCC3P46736 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
BRCC3P46736 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC14.78□□□□□ -0.04
BRCC3P46736 AK2P2-201ENST00000439142 405 ntBASIC14.78□□□□□ -0.04
BRCC3P46736 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC14.78□□□□□ -0.04
BRCC3P46736 AC024293.1-201ENST00000467930 498 ntBASIC14.78□□□□□ -0.04
BRCC3P46736 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC14.78□□□□□ -0.04
BRCC3P46736 CD44-224ENST00000526669 870 ntTSL 5 BASIC14.78□□□□□ -0.04
BRCC3P46736 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC14.78□□□□□ -0.04
BRCC3P46736 GOLGA2P7-209ENST00000560408 745 ntBASIC14.78□□□□□ -0.04
BRCC3P46736 CES1P2-201ENST00000566467 1242 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms