Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SATB2Q9UPW6 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.86□□□□□ -0.19
SATB2Q9UPW6 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SATB2Q9UPW6 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SATB2Q9UPW6 MT3-203ENST00000565838 421 ntTSL 3 BASIC13.86□□□□□ -0.19
SATB2Q9UPW6 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SATB2Q9UPW6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.86□□□□□ -0.19
SATB2Q9UPW6 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.86□□□□□ -0.19
SATB2Q9UPW6 AP001184.1-201ENST00000637936 376 ntBASIC13.86□□□□□ -0.19
SATB2Q9UPW6 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SATB2Q9UPW6 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SATB2Q9UPW6 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
SATB2Q9UPW6 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SATB2Q9UPW6 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SATB2Q9UPW6 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SATB2Q9UPW6 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SATB2Q9UPW6 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SATB2Q9UPW6 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC13.86□□□□□ -0.19
SATB2Q9UPW6 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SATB2Q9UPW6 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.86□□□□□ -0.19
SATB2Q9UPW6 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.85□□□□□ -0.19
SATB2Q9UPW6 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 AC003686.1-201ENST00000550956 1034 ntBASIC13.85□□□□□ -0.19
SATB2Q9UPW6 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 AC141586.1-203ENST00000567242 366 ntBASIC13.85□□□□□ -0.19
SATB2Q9UPW6 RN7SL470P-201ENST00000583069 259 ntBASIC13.85□□□□□ -0.19
SATB2Q9UPW6 AC005357.2-202ENST00000590507 1060 ntBASIC13.85□□□□□ -0.19
SATB2Q9UPW6 AL022334.2-201ENST00000610000 484 ntBASIC13.85□□□□□ -0.19
SATB2Q9UPW6 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SATB2Q9UPW6 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
SATB2Q9UPW6 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SATB2Q9UPW6 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.84□□□□□ -0.19
SATB2Q9UPW6 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SATB2Q9UPW6 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SATB2Q9UPW6 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13.84□□□□□ -0.19
SATB2Q9UPW6 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.84□□□□□ -0.19
SATB2Q9UPW6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SATB2Q9UPW6 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SATB2Q9UPW6 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SATB2Q9UPW6 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SATB2Q9UPW6 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SATB2Q9UPW6 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SATB2Q9UPW6 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SATB2Q9UPW6 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.84□□□□□ -0.19
SATB2Q9UPW6 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
SATB2Q9UPW6 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.84□□□□□ -0.19
SATB2Q9UPW6 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC13.84□□□□□ -0.19
SATB2Q9UPW6 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SATB2Q9UPW6 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC13.84□□□□□ -0.19
SATB2Q9UPW6 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.84□□□□□ -0.19
SATB2Q9UPW6 AC092638.2-201ENST00000441105 947 ntBASIC13.84□□□□□ -0.19
SATB2Q9UPW6 AL354861.1-201ENST00000445213 355 ntBASIC13.84□□□□□ -0.19
SATB2Q9UPW6 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms