Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC015936.2-201ENST00000593177 259 ntBASIC10.72□□□□□ -0.69
VGLL1Q99990 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VGLL1Q99990 AC132192.2-201ENST00000596206 1147 ntBASIC10.72□□□□□ -0.69
VGLL1Q99990 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC10.72□□□□□ -0.69
VGLL1Q99990 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC10.72□□□□□ -0.69
VGLL1Q99990 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC10.72□□□□□ -0.69
VGLL1Q99990 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VGLL1Q99990 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VGLL1Q99990 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VGLL1Q99990 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VGLL1Q99990 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC10.72□□□□□ -0.69
VGLL1Q99990 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
VGLL1Q99990 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VGLL1Q99990 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VGLL1Q99990 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
VGLL1Q99990 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
VGLL1Q99990 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC10.72□□□□□ -0.69
VGLL1Q99990 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VGLL1Q99990 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VGLL1Q99990 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC10.72□□□□□ -0.69
VGLL1Q99990 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC10.72□□□□□ -0.69
VGLL1Q99990 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
VGLL1Q99990 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VGLL1Q99990 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VGLL1Q99990 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VGLL1Q99990 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VGLL1Q99990 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC10.72□□□□□ -0.69
VGLL1Q99990 POM121L4P-202ENST00000427789 1891 ntBASIC10.72□□□□□ -0.69
VGLL1Q99990 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VGLL1Q99990 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
VGLL1Q99990 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VGLL1Q99990 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VGLL1Q99990 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC10.72□□□□□ -0.69
VGLL1Q99990 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VGLL1Q99990 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
VGLL1Q99990 USP39-220ENST00000613444 2161 ntTSL 2 BASIC10.72□□□□□ -0.69
VGLL1Q99990 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC10.72□□□□□ -0.69
VGLL1Q99990 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
VGLL1Q99990 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VGLL1Q99990 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC10.72□□□□□ -0.69
VGLL1Q99990 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
VGLL1Q99990 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC10.71□□□□□ -0.69
VGLL1Q99990 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
VGLL1Q99990 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC10.71□□□□□ -0.69
VGLL1Q99990 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
VGLL1Q99990 TNRC18P1-201ENST00000502875 3650 ntBASIC10.71□□□□□ -0.69
VGLL1Q99990 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC10.71□□□□□ -0.69
VGLL1Q99990 RBM38-204ENST00000371219 760 ntTSL 2 BASIC10.71□□□□□ -0.69
VGLL1Q99990 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 HMGA1P1-201ENST00000415560 1062 ntBASIC10.71□□□□□ -0.69
VGLL1Q99990 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC10.71□□□□□ -0.69
VGLL1Q99990 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 AC136604.1-202ENST00000425471 771 ntBASIC10.71□□□□□ -0.69
VGLL1Q99990 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 HMGN1P19-201ENST00000436976 333 ntBASIC10.71□□□□□ -0.69
VGLL1Q99990 MKRN5P-201ENST00000445263 1467 ntBASIC10.71□□□□□ -0.69
VGLL1Q99990 RCC2P1-201ENST00000452257 1476 ntBASIC10.71□□□□□ -0.69
VGLL1Q99990 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC10.71□□□□□ -0.69
VGLL1Q99990 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
VGLL1Q99990 AC007551.1-201ENST00000457394 519 ntBASIC10.71□□□□□ -0.69
VGLL1Q99990 KRT18P15-201ENST00000458108 1291 ntBASIC10.71□□□□□ -0.69
VGLL1Q99990 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC10.71□□□□□ -0.69
VGLL1Q99990 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC10.71□□□□□ -0.69
VGLL1Q99990 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC10.71□□□□□ -0.69
VGLL1Q99990 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC10.71□□□□□ -0.69
VGLL1Q99990 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC10.71□□□□□ -0.69
VGLL1Q99990 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
VGLL1Q99990 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
VGLL1Q99990 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC10.71□□□□□ -0.69
VGLL1Q99990 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 KRT90P-201ENST00000549264 1064 ntBASIC10.71□□□□□ -0.69
VGLL1Q99990 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC10.71□□□□□ -0.69
VGLL1Q99990 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms