Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 MARK2P16-201ENST00000605714 1723 ntBASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 DUTP3-201ENST00000450025 415 ntBASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 AP000358.1-201ENST00000456260 156 ntBASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 AL390728.6-201ENST00000566446 1246 ntBASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 NDUFB10P1-201ENST00000567319 521 ntBASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 AC007326.1-201ENST00000604539 458 ntBASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD3Q7Z3D4 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 MIR557-201ENST00000385239 98 ntBASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 AC079328.1-201ENST00000560358 952 ntBASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 MIR3908-201ENST00000579798 126 ntBASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 AL133467.4-201ENST00000602953 725 ntBASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 AC079336.7-201ENST00000623428 1078 ntBASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.12□□□□□ -0.15
LYSMD3Q7Z3D4 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms