Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 OR2I1P-210ENST00000642037 4691 ntBASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 HNRNPA3P12-201ENST00000437410 1063 ntBASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 CCND3P1-201ENST00000438347 580 ntBASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 HNRNPA1P10-201ENST00000444945 962 ntBASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 AC113347.2-201ENST00000512350 279 ntBASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 IGHVII-74-1-201ENST00000517572 241 ntBASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 ACY3-202ENST00000529256 933 ntTSL 3 BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 AC023051.2-201ENST00000541141 460 ntBASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 GRAMD4P6-201ENST00000556999 244 ntBASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD4Q5XG99 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 RCC2P1-201ENST00000452257 1476 ntBASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 KRT8P25-201ENST00000473150 1456 ntBASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 AC092384.3-202ENST00000564646 2873 ntBASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 MIR632-201ENST00000385193 94 ntBASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 PHBP10-201ENST00000416467 784 ntBASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 RNU1-80P-201ENST00000459500 161 ntBASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 ALG1L15P-201ENST00000482834 794 ntBASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 RN7SL480P-201ENST00000581481 294 ntBASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 AC245369.7-201ENST00000631386 350 ntBASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms