Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
RFTN2Q52LD8 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
RFTN2Q52LD8 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.52□□□□□ -0.24
RFTN2Q52LD8 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RFTN2Q52LD8 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.52□□□□□ -0.25
RFTN2Q52LD8 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 MTX1P1-201ENST00000440904 838 ntBASIC13.52□□□□□ -0.25
RFTN2Q52LD8 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 AC119751.2-201ENST00000504529 210 ntBASIC13.52□□□□□ -0.25
RFTN2Q52LD8 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 AL023803.2-201ENST00000620080 638 ntBASIC13.52□□□□□ -0.25
RFTN2Q52LD8 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.52□□□□□ -0.25
RFTN2Q52LD8 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 MANEA-AS1-201ENST00000564541 2268 ntBASIC13.51□□□□□ -0.25
RFTN2Q52LD8 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 AC026271.4-201ENST00000578214 1833 ntBASIC13.51□□□□□ -0.25
RFTN2Q52LD8 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 AC011742.3-201ENST00000439053 820 ntBASIC13.51□□□□□ -0.25
RFTN2Q52LD8 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 EIF4HP1-201ENST00000453115 687 ntBASIC13.51□□□□□ -0.25
RFTN2Q52LD8 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 AC010328.2-201ENST00000597698 1111 ntBASIC13.51□□□□□ -0.25
RFTN2Q52LD8 AL096828.3-201ENST00000615354 462 ntBASIC13.51□□□□□ -0.25
RFTN2Q52LD8 AC009542.2-202ENST00000619004 1067 ntBASIC13.51□□□□□ -0.25
RFTN2Q52LD8 AC022748.3-201ENST00000621828 275 ntBASIC13.51□□□□□ -0.25
RFTN2Q52LD8 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RFTN2Q52LD8 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms