Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC092570.1-201ENST00000414446 469 ntBASIC13.31□□□□□ -0.28
GABREP78334 NRADDP-201ENST00000437305 691 ntBASIC13.31□□□□□ -0.28
GABREP78334 GOLGA6L16P-201ENST00000441780 1299 ntBASIC13.31□□□□□ -0.28
GABREP78334 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
GABREP78334 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC13.31□□□□□ -0.28
GABREP78334 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC13.31□□□□□ -0.28
GABREP78334 IGHEP2-201ENST00000519308 1256 ntBASIC13.31□□□□□ -0.28
GABREP78334 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC13.31□□□□□ -0.28
GABREP78334 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC13.31□□□□□ -0.28
GABREP78334 RN7SL556P-201ENST00000582856 298 ntBASIC13.31□□□□□ -0.28
GABREP78334 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC13.31□□□□□ -0.28
GABREP78334 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC13.31□□□□□ -0.28
GABREP78334 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.31□□□□□ -0.28
GABREP78334 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GABREP78334 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GABREP78334 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GABREP78334 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
GABREP78334 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
GABREP78334 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
GABREP78334 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GABREP78334 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GABREP78334 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GABREP78334 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
GABREP78334 AC113367.3-201ENST00000508316 1912 ntBASIC13.31□□□□□ -0.28
GABREP78334 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.31□□□□□ -0.28
GABREP78334 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GABREP78334 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABREP78334 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.3□□□□□ -0.28
GABREP78334 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABREP78334 AC026748.1-201ENST00000624349 3251 ntBASIC13.3□□□□□ -0.28
GABREP78334 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GABREP78334 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GABREP78334 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.3□□□□□ -0.28
GABREP78334 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABREP78334 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABREP78334 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABREP78334 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
GABREP78334 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABREP78334 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABREP78334 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GABREP78334 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC13.3□□□□□ -0.28
GABREP78334 AC073210.1-201ENST00000414799 232 ntBASIC13.3□□□□□ -0.28
GABREP78334 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.3□□□□□ -0.28
GABREP78334 AC104961.1-201ENST00000427605 771 ntBASIC13.3□□□□□ -0.28
GABREP78334 AC023968.2-201ENST00000560593 1049 ntBASIC13.3□□□□□ -0.28
GABREP78334 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
GABREP78334 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC13.3□□□□□ -0.28
GABREP78334 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC13.3□□□□□ -0.28
GABREP78334 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABREP78334 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC13.3□□□□□ -0.28
GABREP78334 RARS-210ENST00000626454 177 ntTSL 5 BASIC13.3□□□□□ -0.28
GABREP78334 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC13.3□□□□□ -0.28
GABREP78334 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC13.3□□□□□ -0.28
GABREP78334 AC139713.2-207ENST00000641556 1292 ntBASIC13.3□□□□□ -0.28
GABREP78334 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.3□□□□□ -0.28
GABREP78334 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABREP78334 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABREP78334 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABREP78334 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.3□□□□□ -0.28
GABREP78334 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
GABREP78334 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.3□□□□□ -0.28
GABREP78334 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.3□□□□□ -0.28
GABREP78334 AC117503.4-201ENST00000623229 1418 ntBASIC13.3□□□□□ -0.28
GABREP78334 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABREP78334 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABREP78334 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GABREP78334 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC13.29□□□□□ -0.28
GABREP78334 RPL13AP3-202ENST00000494676 1473 ntBASIC13.29□□□□□ -0.28
GABREP78334 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GABREP78334 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GABREP78334 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
GABREP78334 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
GABREP78334 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GABREP78334 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
GABREP78334 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.29□□□□□ -0.28
GABREP78334 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
GABREP78334 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GABREP78334 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GABREP78334 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
GABREP78334 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.29□□□□□ -0.28
GABREP78334 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GABREP78334 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GABREP78334 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GABREP78334 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GABREP78334 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.29□□□□□ -0.28
GABREP78334 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GABREP78334 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
GABREP78334 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
GABREP78334 AC106827.1-201ENST00000366454 431 ntBASIC13.29□□□□□ -0.28
GABREP78334 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
GABREP78334 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
GABREP78334 AL080243.1-201ENST00000423293 1060 ntBASIC13.29□□□□□ -0.28
GABREP78334 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC13.29□□□□□ -0.28
GABREP78334 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
GABREP78334 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC13.29□□□□□ -0.28
GABREP78334 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC13.29□□□□□ -0.28
GABREP78334 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
GABREP78334 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
GABREP78334 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC13.29□□□□□ -0.28
GABREP78334 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms