Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC13.13□□□□□ -0.31
PER3P56645 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.13□□□□□ -0.31
PER3P56645 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.13□□□□□ -0.31
PER3P56645 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
PER3P56645 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
PER3P56645 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
PER3P56645 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
PER3P56645 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.12□□□□□ -0.31
PER3P56645 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
PER3P56645 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.12□□□□□ -0.31
PER3P56645 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
PER3P56645 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.12□□□□□ -0.31
PER3P56645 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
PER3P56645 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.12□□□□□ -0.31
PER3P56645 OR2K2-202ENST00000374428 1038 ntBASIC13.12□□□□□ -0.31
PER3P56645 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.12□□□□□ -0.31
PER3P56645 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC13.12□□□□□ -0.31
PER3P56645 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC13.12□□□□□ -0.31
PER3P56645 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC13.12□□□□□ -0.31
PER3P56645 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.12□□□□□ -0.31
PER3P56645 CICP12-201ENST00000455801 843 ntBASIC13.12□□□□□ -0.31
PER3P56645 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC13.12□□□□□ -0.31
PER3P56645 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.12□□□□□ -0.31
PER3P56645 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
PER3P56645 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC13.12□□□□□ -0.31
PER3P56645 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
PER3P56645 AC131206.1-201ENST00000538078 1211 ntBASIC13.12□□□□□ -0.31
PER3P56645 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
PER3P56645 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
PER3P56645 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC13.12□□□□□ -0.31
PER3P56645 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
PER3P56645 MIR3677-201ENST00000578964 60 ntBASIC13.12□□□□□ -0.31
PER3P56645 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC13.12□□□□□ -0.31
PER3P56645 AC138894.2-201ENST00000602838 371 ntBASIC13.12□□□□□ -0.31
PER3P56645 RNF146-211ENST00000609447 607 ntTSL 4 BASIC13.12□□□□□ -0.31
PER3P56645 AL157813.1-201ENST00000612996 587 ntBASIC13.12□□□□□ -0.31
PER3P56645 AC007718.1-201ENST00000621078 280 ntBASIC13.12□□□□□ -0.31
PER3P56645 AL132780.4-201ENST00000624870 1135 ntBASIC13.12□□□□□ -0.31
PER3P56645 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
PER3P56645 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.12□□□□□ -0.31
PER3P56645 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.12□□□□□ -0.31
PER3P56645 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PER3P56645 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.11□□□□□ -0.31
PER3P56645 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
PER3P56645 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.11□□□□□ -0.31
PER3P56645 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
PER3P56645 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.11□□□□□ -0.31
PER3P56645 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.11□□□□□ -0.31
PER3P56645 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
PER3P56645 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.11□□□□□ -0.31
PER3P56645 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
PER3P56645 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.11□□□□□ -0.31
PER3P56645 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PER3P56645 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.11□□□□□ -0.31
PER3P56645 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms