Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
TRBV12-3P01733 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 FMO6P-201ENST00000236166 1620 ntBASIC10.85□□□□□ -0.67
TRBV12-3P01733 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC10.85□□□□□ -0.67
TRBV12-3P01733 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC10.85□□□□□ -0.67
TRBV12-3P01733 UPF3AP2-201ENST00000457924 1132 ntBASIC10.85□□□□□ -0.67
TRBV12-3P01733 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC10.85□□□□□ -0.67
TRBV12-3P01733 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC10.85□□□□□ -0.67
TRBV12-3P01733 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC10.85□□□□□ -0.67
TRBV12-3P01733 AC105129.2-201ENST00000559536 390 ntBASIC10.85□□□□□ -0.67
TRBV12-3P01733 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC10.85□□□□□ -0.67
TRBV12-3P01733 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 PPA1-206ENST00000625364 644 ntTSL 5 BASIC10.85□□□□□ -0.67
TRBV12-3P01733 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
TRBV12-3P01733 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
TRBV12-3P01733 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC10.85□□□□□ -0.67
TRBV12-3P01733 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC10.85□□□□□ -0.67
TRBV12-3P01733 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
TRBV12-3P01733 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
TRBV12-3P01733 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 AC087386.2-201ENST00000623212 4637 ntBASIC10.85□□□□□ -0.67
TRBV12-3P01733 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC10.85□□□□□ -0.67
TRBV12-3P01733 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
TRBV12-3P01733 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
TRBV12-3P01733 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 API5-208ENST00000531273 1868 ntTSL 2 BASIC10.85□□□□□ -0.67
TRBV12-3P01733 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRBV12-3P01733 AL031595.1-201ENST00000623969 4709 ntBASIC10.84□□□□□ -0.67
TRBV12-3P01733 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 KRT8P18-201ENST00000413425 1445 ntBASIC10.84□□□□□ -0.67
TRBV12-3P01733 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 HLA-DQB1-202ENST00000399079 1501 ntBASIC10.84□□□□□ -0.67
TRBV12-3P01733 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 AC005562.1-201ENST00000583030 3219 ntBASIC10.84□□□□□ -0.67
TRBV12-3P01733 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 DNAJB1P1-201ENST00000429417 1024 ntBASIC10.84□□□□□ -0.67
TRBV12-3P01733 AC234782.1-201ENST00000451950 919 ntBASIC10.84□□□□□ -0.67
TRBV12-3P01733 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms