Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC15.7■□□□□ 0.1
PTPN18Q99952 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC15.7■□□□□ 0.1
PTPN18Q99952 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC15.7■□□□□ 0.1
PTPN18Q99952 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
PTPN18Q99952 ACTG1P23-201ENST00000437653 1074 ntBASIC15.7■□□□□ 0.1
PTPN18Q99952 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC15.7■□□□□ 0.1
PTPN18Q99952 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC15.7■□□□□ 0.1
PTPN18Q99952 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC15.7■□□□□ 0.1
PTPN18Q99952 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC15.7■□□□□ 0.1
PTPN18Q99952 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN18Q99952 MIR3940-201ENST00000579148 102 ntBASIC15.7■□□□□ 0.1
PTPN18Q99952 RN7SL300P-201ENST00000582522 318 ntBASIC15.7■□□□□ 0.1
PTPN18Q99952 NAT9-219ENST00000582524 573 ntTSL 4 BASIC15.7■□□□□ 0.1
PTPN18Q99952 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN18Q99952 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.7■□□□□ 0.1
PTPN18Q99952 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN18Q99952 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN18Q99952 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN18Q99952 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.7■□□□□ 0.1
PTPN18Q99952 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PTPN18Q99952 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN18Q99952 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN18Q99952 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.7■□□□□ 0.1
PTPN18Q99952 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN18Q99952 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.7■□□□□ 0.1
PTPN18Q99952 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN18Q99952 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.69■□□□□ 0.1
PTPN18Q99952 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN18Q99952 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN18Q99952 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN18Q99952 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN18Q99952 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.69■□□□□ 0.1
PTPN18Q99952 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PTPN18Q99952 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN18Q99952 POP5-201ENST00000341039 913 ntTSL 2 BASIC15.69■□□□□ 0.1
PTPN18Q99952 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC15.69■□□□□ 0.1
PTPN18Q99952 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PTPN18Q99952 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN18Q99952 RBMXP1-201ENST00000408004 1191 ntBASIC15.69■□□□□ 0.1
PTPN18Q99952 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC15.69■□□□□ 0.1
PTPN18Q99952 RN7SL2-201ENST00000490232 300 ntBASIC15.69■□□□□ 0.1
PTPN18Q99952 AL450346.2-201ENST00000495602 1024 ntBASIC15.69■□□□□ 0.1
PTPN18Q99952 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN18Q99952 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC15.69■□□□□ 0.1
PTPN18Q99952 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC15.69■□□□□ 0.1
PTPN18Q99952 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN18Q99952 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC15.69■□□□□ 0.1
PTPN18Q99952 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC15.69■□□□□ 0.1
PTPN18Q99952 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PTPN18Q99952 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC15.69■□□□□ 0.1
PTPN18Q99952 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC15.69■□□□□ 0.1
PTPN18Q99952 RN7SL4P-201ENST00000584058 295 ntBASIC15.69■□□□□ 0.1
PTPN18Q99952 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
PTPN18Q99952 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC15.69■□□□□ 0.1
PTPN18Q99952 AC134878.2-201ENST00000620700 1265 ntBASIC15.69■□□□□ 0.1
PTPN18Q99952 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PTPN18Q99952 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.69■□□□□ 0.1
PTPN18Q99952 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN18Q99952 RCC2P5-201ENST00000492126 1487 ntBASIC15.69■□□□□ 0.1
PTPN18Q99952 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN18Q99952 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN18Q99952 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN18Q99952 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC15.69■□□□□ 0.1
PTPN18Q99952 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PTPN18Q99952 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.69■□□□□ 0.1
PTPN18Q99952 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC15.69■□□□□ 0.1
PTPN18Q99952 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PTPN18Q99952 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN18Q99952 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN18Q99952 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN18Q99952 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN18Q99952 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
PTPN18Q99952 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTPN18Q99952 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN18Q99952 FMO6P-201ENST00000236166 1620 ntBASIC15.68■□□□□ 0.1
PTPN18Q99952 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN18Q99952 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN18Q99952 AL031590.1-202ENST00000641466 1737 ntBASIC15.68■□□□□ 0.1
PTPN18Q99952 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.68■□□□□ 0.1
PTPN18Q99952 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN18Q99952 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN18Q99952 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PTPN18Q99952 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN18Q99952 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN18Q99952 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PTPN18Q99952 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN18Q99952 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN18Q99952 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PTPN18Q99952 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PTPN18Q99952 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN18Q99952 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PTPN18Q99952 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN18Q99952 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN18Q99952 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTPN18Q99952 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
PTPN18Q99952 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PTPN18Q99952 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC15.68■□□□□ 0.1
PTPN18Q99952 SNORD88B-201ENST00000408454 91 ntBASIC15.68■□□□□ 0.1
PTPN18Q99952 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC15.68■□□□□ 0.1
PTPN18Q99952 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms