Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 CDK4-206ENST00000549606 558 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 ARL16-210ENST00000574938 751 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 CHCHD2P3-201ENST00000603038 451 ntBASIC11.45□□□□□ -0.58
RAB40CQ96S21 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 AP003969.2-201ENST00000623739 2275 ntBASIC11.45□□□□□ -0.58
RAB40CQ96S21 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 MARK2P16-201ENST00000605714 1723 ntBASIC11.45□□□□□ -0.58
RAB40CQ96S21 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 CCT8L1P-201ENST00000465400 1674 ntBASIC11.45□□□□□ -0.58
RAB40CQ96S21 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB40CQ96S21 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB40CQ96S21 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 ZNF493-208ENST00000599461 1769 ntBASIC11.44□□□□□ -0.58
RAB40CQ96S21 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 AC022364.1-202ENST00000617468 2409 ntBASIC11.44□□□□□ -0.58
RAB40CQ96S21 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 HMGN1P19-201ENST00000436976 333 ntBASIC11.44□□□□□ -0.58
RAB40CQ96S21 SKA2-202ENST00000437036 625 ntTSL 2 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 GALT-202ENST00000450095 1280 ntTSL 2 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 CU634019.7-201ENST00000624153 1185 ntBASIC11.44□□□□□ -0.58
RAB40CQ96S21 FP236241.2-201ENST00000624906 1185 ntBASIC11.44□□□□□ -0.58
RAB40CQ96S21 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 EML1-203ENST00000334192 4064 ntTSL 5 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 AC131902.2-201ENST00000566892 2172 ntBASIC11.44□□□□□ -0.58
RAB40CQ96S21 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms