Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH3Q96II8 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH3Q96II8 KRT8P18-201ENST00000413425 1445 ntBASIC15.14■□□□□ 0.01
LRCH3Q96II8 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LRCH3Q96II8 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LRCH3Q96II8 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH3Q96II8 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH3Q96II8 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH3Q96II8 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LRCH3Q96II8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH3Q96II8 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH3Q96II8 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH3Q96II8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH3Q96II8 AC005912.2-201ENST00000619492 2400 ntBASIC15.14■□□□□ 0.01
LRCH3Q96II8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH3Q96II8 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH3Q96II8 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
LRCH3Q96II8 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
LRCH3Q96II8 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH3Q96II8 AJ011931.1-201ENST00000618749 2492 ntBASIC15.14■□□□□ 0.01
LRCH3Q96II8 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
LRCH3Q96II8 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH3Q96II8 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH3Q96II8 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH3Q96II8 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH3Q96II8 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH3Q96II8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH3Q96II8 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH3Q96II8 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH3Q96II8 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH3Q96II8 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH3Q96II8 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH3Q96II8 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 UGT1A12P-201ENST00000447084 853 ntBASIC15.13■□□□□ 0.01
LRCH3Q96II8 PSME2P2-201ENST00000453033 700 ntBASIC15.13■□□□□ 0.01
LRCH3Q96II8 AL049829.1-201ENST00000465411 156 ntBASIC15.13■□□□□ 0.01
LRCH3Q96II8 RN7SL684P-201ENST00000465665 294 ntBASIC15.13■□□□□ 0.01
LRCH3Q96II8 AC087273.1-201ENST00000519368 529 ntTSL 2 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 MT3-202ENST00000561640 514 ntTSL 3 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH3Q96II8 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH3Q96II8 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH3Q96II8 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH3Q96II8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH3Q96II8 GUCY2EP-203ENST00000531117 1918 ntBASIC15.13■□□□□ 0.01
LRCH3Q96II8 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH3Q96II8 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LRCH3Q96II8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH3Q96II8 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH3Q96II8 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH3Q96II8 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH3Q96II8 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.12■□□□□ 0.01
LRCH3Q96II8 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.12■□□□□ 0.01
LRCH3Q96II8 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH3Q96II8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH3Q96II8 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH3Q96II8 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH3Q96II8 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC15.12■□□□□ 0.01
LRCH3Q96II8 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC15.12■□□□□ 0.01
LRCH3Q96II8 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH3Q96II8 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH3Q96II8 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH3Q96II8 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH3Q96II8 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC15.12■□□□□ 0.01
LRCH3Q96II8 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH3Q96II8 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC15.12■□□□□ 0.01
LRCH3Q96II8 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.12■□□□□ 0.01
LRCH3Q96II8 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC15.12■□□□□ 0.01
LRCH3Q96II8 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH3Q96II8 LINC00265-2P-201ENST00000413372 782 ntBASIC15.12■□□□□ 0.01
LRCH3Q96II8 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC15.12■□□□□ 0.01
LRCH3Q96II8 MTND2P9-201ENST00000422293 931 ntBASIC15.12■□□□□ 0.01
LRCH3Q96II8 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH3Q96II8 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.12■□□□□ 0.01
LRCH3Q96II8 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC15.12■□□□□ 0.01
LRCH3Q96II8 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH3Q96II8 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC15.12■□□□□ 0.01
LRCH3Q96II8 RSL24D1P2-201ENST00000445584 366 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms