Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RAE1P78406 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAE1P78406 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.28□□□□□ -0.28
RAE1P78406 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RAE1P78406 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RAE1P78406 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
RAE1P78406 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RAE1P78406 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.27□□□□□ -0.28
RAE1P78406 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RAE1P78406 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC13.27□□□□□ -0.28
RAE1P78406 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RAE1P78406 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.27□□□□□ -0.28
RAE1P78406 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RAE1P78406 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
RAE1P78406 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAE1P78406 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.27□□□□□ -0.29
RAE1P78406 MIR645-201ENST00000385283 94 ntBASIC13.27□□□□□ -0.29
RAE1P78406 AC073869.2-201ENST00000417338 1026 ntBASIC13.27□□□□□ -0.29
RAE1P78406 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RAE1P78406 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RAE1P78406 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.27□□□□□ -0.29
RAE1P78406 AC090857.1-201ENST00000527400 390 ntBASIC13.27□□□□□ -0.29
RAE1P78406 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13.27□□□□□ -0.29
RAE1P78406 KLF17P1-201ENST00000547105 1126 ntBASIC13.27□□□□□ -0.29
RAE1P78406 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RAE1P78406 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.27□□□□□ -0.29
RAE1P78406 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.27□□□□□ -0.29
RAE1P78406 MIR6752-201ENST00000618442 71 ntBASIC13.27□□□□□ -0.29
RAE1P78406 MIR6869-201ENST00000619434 62 ntBASIC13.27□□□□□ -0.29
RAE1P78406 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.27□□□□□ -0.29
RAE1P78406 AC100757.4-201ENST00000626934 759 ntBASIC13.27□□□□□ -0.29
RAE1P78406 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.27□□□□□ -0.29
RAE1P78406 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAE1P78406 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.27□□□□□ -0.29
RAE1P78406 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.27□□□□□ -0.29
RAE1P78406 KRT8P18-201ENST00000413425 1445 ntBASIC13.27□□□□□ -0.29
RAE1P78406 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.27□□□□□ -0.29
RAE1P78406 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.27□□□□□ -0.29
RAE1P78406 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAE1P78406 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAE1P78406 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RAE1P78406 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RAE1P78406 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
RAE1P78406 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
RAE1P78406 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.27□□□□□ -0.29
RAE1P78406 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RAE1P78406 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
RAE1P78406 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RAE1P78406 AC104758.3-203ENST00000562938 2123 ntBASIC13.27□□□□□ -0.29
RAE1P78406 AL359183.1-201ENST00000623796 2132 ntBASIC13.27□□□□□ -0.29
RAE1P78406 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RAE1P78406 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAE1P78406 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC13.27□□□□□ -0.29
RAE1P78406 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAE1P78406 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAE1P78406 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC13.27□□□□□ -0.29
RAE1P78406 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAE1P78406 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.26□□□□□ -0.29
RAE1P78406 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RAE1P78406 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.26□□□□□ -0.29
RAE1P78406 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RAE1P78406 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RAE1P78406 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.26□□□□□ -0.29
RAE1P78406 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.26□□□□□ -0.29
RAE1P78406 TBC1D27-202ENST00000424239 1573 ntBASIC13.26□□□□□ -0.29
RAE1P78406 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.26□□□□□ -0.29
RAE1P78406 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.26□□□□□ -0.29
RAE1P78406 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAE1P78406 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RAE1P78406 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms