Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.43□□□□□ -0.42
SEC61A1P61619 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SEC61A1P61619 AP000593.2-201ENST00000542775 1433 ntBASIC12.43□□□□□ -0.42
SEC61A1P61619 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SEC61A1P61619 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SEC61A1P61619 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.43□□□□□ -0.42
SEC61A1P61619 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 AP001972.5-201ENST00000624624 2338 ntBASIC12.43□□□□□ -0.42
SEC61A1P61619 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.43□□□□□ -0.42
SEC61A1P61619 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC61A1P61619 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.43□□□□□ -0.42
SEC61A1P61619 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.42□□□□□ -0.42
SEC61A1P61619 AC018735.1-201ENST00000437208 1502 ntBASIC12.42□□□□□ -0.42
SEC61A1P61619 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
SEC61A1P61619 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SEC61A1P61619 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.42□□□□□ -0.42
SEC61A1P61619 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.42□□□□□ -0.42
SEC61A1P61619 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SEC61A1P61619 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SEC61A1P61619 AC079178.1-201ENST00000420915 656 ntBASIC12.42□□□□□ -0.42
SEC61A1P61619 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.42□□□□□ -0.42
SEC61A1P61619 TLE1P1-201ENST00000422965 589 ntBASIC12.42□□□□□ -0.42
SEC61A1P61619 AC100850.1-201ENST00000506768 649 ntBASIC12.42□□□□□ -0.42
SEC61A1P61619 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.42□□□□□ -0.42
SEC61A1P61619 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.42□□□□□ -0.42
SEC61A1P61619 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.42□□□□□ -0.42
SEC61A1P61619 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
SEC61A1P61619 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.42□□□□□ -0.42
SEC61A1P61619 AC244093.1-201ENST00000610837 814 ntBASIC12.42□□□□□ -0.42
SEC61A1P61619 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
SEC61A1P61619 MIR6787-201ENST00000616675 61 ntBASIC12.42□□□□□ -0.42
SEC61A1P61619 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.42□□□□□ -0.42
SEC61A1P61619 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.42□□□□□ -0.42
SEC61A1P61619 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.42□□□□□ -0.42
SEC61A1P61619 RN7SL832P-201ENST00000607781 1756 ntBASIC12.42□□□□□ -0.42
SEC61A1P61619 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
SEC61A1P61619 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.42□□□□□ -0.42
SEC61A1P61619 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.42□□□□□ -0.42
SEC61A1P61619 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.42□□□□□ -0.42
SEC61A1P61619 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 AC020907.1-201ENST00000616460 1350 ntBASIC12.42□□□□□ -0.42
SEC61A1P61619 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.42□□□□□ -0.42
SEC61A1P61619 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC61A1P61619 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.42□□□□□ -0.42
SEC61A1P61619 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.41□□□□□ -0.42
SEC61A1P61619 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.41□□□□□ -0.42
SEC61A1P61619 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.41□□□□□ -0.42
SEC61A1P61619 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.41□□□□□ -0.42
SEC61A1P61619 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SEC61A1P61619 AL136309.1-201ENST00000403917 691 ntBASIC12.41□□□□□ -0.42
SEC61A1P61619 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
SEC61A1P61619 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.41□□□□□ -0.42
SEC61A1P61619 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SEC61A1P61619 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.41□□□□□ -0.42
SEC61A1P61619 AC005730.2-201ENST00000564549 1184 ntBASIC12.41□□□□□ -0.42
SEC61A1P61619 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms