Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CEACAM3P40198 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CEACAM3P40198 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC11.54□□□□□ -0.56
CEACAM3P40198 ELK2AP-201ENST00000392510 1007 ntBASIC11.54□□□□□ -0.56
CEACAM3P40198 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CEACAM3P40198 LBH-202ENST00000401506 485 ntTSL 3 BASIC11.54□□□□□ -0.56
CEACAM3P40198 KRTAP19-9P-201ENST00000421795 191 ntBASIC11.54□□□□□ -0.56
CEACAM3P40198 ISCA2P1-201ENST00000425548 448 ntBASIC11.54□□□□□ -0.56
CEACAM3P40198 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CEACAM3P40198 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC11.54□□□□□ -0.56
CEACAM3P40198 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC11.54□□□□□ -0.56
CEACAM3P40198 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CEACAM3P40198 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CEACAM3P40198 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC11.54□□□□□ -0.56
CEACAM3P40198 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CEACAM3P40198 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC11.54□□□□□ -0.56
CEACAM3P40198 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC11.54□□□□□ -0.56
CEACAM3P40198 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC11.54□□□□□ -0.56
CEACAM3P40198 MIR6769A-201ENST00000617340 73 ntBASIC11.54□□□□□ -0.56
CEACAM3P40198 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CEACAM3P40198 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CEACAM3P40198 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CEACAM3P40198 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC11.54□□□□□ -0.56
CEACAM3P40198 AC061965.1-201ENST00000560524 1465 ntBASIC11.54□□□□□ -0.56
CEACAM3P40198 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CEACAM3P40198 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CEACAM3P40198 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CEACAM3P40198 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
CEACAM3P40198 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CEACAM3P40198 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CEACAM3P40198 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CEACAM3P40198 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CEACAM3P40198 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
CEACAM3P40198 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CEACAM3P40198 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CEACAM3P40198 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.54□□□□□ -0.56
CEACAM3P40198 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC11.54□□□□□ -0.56
CEACAM3P40198 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CEACAM3P40198 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC11.54□□□□□ -0.56
CEACAM3P40198 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CEACAM3P40198 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CEACAM3P40198 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CEACAM3P40198 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.54□□□□□ -0.56
CEACAM3P40198 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.54□□□□□ -0.56
CEACAM3P40198 AC027612.1-201ENST00000445234 2395 ntBASIC11.54□□□□□ -0.56
CEACAM3P40198 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.54□□□□□ -0.56
CEACAM3P40198 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CEACAM3P40198 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC11.54□□□□□ -0.56
CEACAM3P40198 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CEACAM3P40198 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CEACAM3P40198 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CEACAM3P40198 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
CEACAM3P40198 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.54□□□□□ -0.56
CEACAM3P40198 AL139158.3-201ENST00000641212 1562 ntBASIC11.54□□□□□ -0.56
CEACAM3P40198 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
CEACAM3P40198 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CEACAM3P40198 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
CEACAM3P40198 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 MST1P2-201ENST00000457982 2291 ntBASIC11.53□□□□□ -0.56
CEACAM3P40198 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.53□□□□□ -0.56
CEACAM3P40198 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC11.53□□□□□ -0.56
CEACAM3P40198 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
CEACAM3P40198 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
CEACAM3P40198 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC11.53□□□□□ -0.56
CEACAM3P40198 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
CEACAM3P40198 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 NME6-203ENST00000415644 849 ntTSL 2 BASIC11.53□□□□□ -0.56
CEACAM3P40198 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC11.53□□□□□ -0.56
CEACAM3P40198 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC11.53□□□□□ -0.56
CEACAM3P40198 AC005077.2-201ENST00000449786 690 ntBASIC11.53□□□□□ -0.56
CEACAM3P40198 SPTLC1P5-201ENST00000450718 252 ntBASIC11.53□□□□□ -0.56
CEACAM3P40198 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC11.53□□□□□ -0.56
CEACAM3P40198 REEP1-202ENST00000453231 940 ntTSL 2 BASIC11.53□□□□□ -0.56
CEACAM3P40198 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC11.53□□□□□ -0.56
CEACAM3P40198 HIST2H2BC-201ENST00000498492 580 ntBASIC11.53□□□□□ -0.56
CEACAM3P40198 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC11.53□□□□□ -0.56
CEACAM3P40198 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC11.53□□□□□ -0.56
CEACAM3P40198 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
CEACAM3P40198 CMC2-204ENST00000562713 573 ntTSL 3 BASIC11.53□□□□□ -0.56
CEACAM3P40198 CMC2-209ENST00000565108 399 ntTSL 2 BASIC11.53□□□□□ -0.56
CEACAM3P40198 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC11.53□□□□□ -0.56
CEACAM3P40198 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC11.53□□□□□ -0.56
CEACAM3P40198 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
CEACAM3P40198 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC11.53□□□□□ -0.56
CEACAM3P40198 AP001505.2-201ENST00000616815 443 ntBASIC11.53□□□□□ -0.56
CEACAM3P40198 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms