Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
FREM3P0C091 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
FREM3P0C091 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
FREM3P0C091 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.74□□□□□ -0.37
FREM3P0C091 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
FREM3P0C091 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.74□□□□□ -0.37
FREM3P0C091 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
FREM3P0C091 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.74□□□□□ -0.37
FREM3P0C091 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
FREM3P0C091 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
FREM3P0C091 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.73□□□□□ -0.37
FREM3P0C091 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 AC063926.3-201ENST00000624734 5658 ntBASIC12.73□□□□□ -0.37
FREM3P0C091 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
FREM3P0C091 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC12.73□□□□□ -0.37
FREM3P0C091 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC12.73□□□□□ -0.37
FREM3P0C091 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.73□□□□□ -0.37
FREM3P0C091 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC12.73□□□□□ -0.37
FREM3P0C091 KRT8P2-201ENST00000556193 944 ntBASIC12.73□□□□□ -0.37
FREM3P0C091 SNX1-214ENST00000625244 324 ntTSL 5 BASIC12.73□□□□□ -0.37
FREM3P0C091 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC12.73□□□□□ -0.37
FREM3P0C091 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.73□□□□□ -0.37
FREM3P0C091 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
FREM3P0C091 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.73□□□□□ -0.37
FREM3P0C091 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.73□□□□□ -0.37
FREM3P0C091 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
FREM3P0C091 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.73□□□□□ -0.37
FREM3P0C091 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
FREM3P0C091 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
FREM3P0C091 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
FREM3P0C091 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.73□□□□□ -0.37
FREM3P0C091 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 AC107918.4-201ENST00000641966 3141 ntBASIC12.73□□□□□ -0.37
FREM3P0C091 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.73□□□□□ -0.37
FREM3P0C091 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.73□□□□□ -0.37
FREM3P0C091 AC253536.4-201ENST00000440539 267 ntBASIC12.73□□□□□ -0.37
FREM3P0C091 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.73□□□□□ -0.37
FREM3P0C091 RPL18AP3-201ENST00000462885 528 ntBASIC12.73□□□□□ -0.37
FREM3P0C091 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.73□□□□□ -0.37
FREM3P0C091 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC12.73□□□□□ -0.37
FREM3P0C091 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FREM3P0C091 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.72□□□□□ -0.37
FREM3P0C091 NCLP1-201ENST00000445357 1963 ntBASIC12.72□□□□□ -0.37
FREM3P0C091 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
FREM3P0C091 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.72□□□□□ -0.37
FREM3P0C091 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FREM3P0C091 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
FREM3P0C091 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.72□□□□□ -0.37
FREM3P0C091 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FREM3P0C091 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FREM3P0C091 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FREM3P0C091 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
FREM3P0C091 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FREM3P0C091 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FREM3P0C091 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.72□□□□□ -0.37
FREM3P0C091 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FREM3P0C091 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
FREM3P0C091 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FREM3P0C091 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FREM3P0C091 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FREM3P0C091 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FREM3P0C091 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FREM3P0C091 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FREM3P0C091 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FREM3P0C091 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FREM3P0C091 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FREM3P0C091 AL354861.1-201ENST00000445213 355 ntBASIC12.72□□□□□ -0.37
FREM3P0C091 AC079112.1-201ENST00000454972 939 ntBASIC12.72□□□□□ -0.37
FREM3P0C091 PARP8-218ENST00000513738 596 ntTSL 4 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms