Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
RETP07949 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RETP07949 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RETP07949 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RETP07949 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RETP07949 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RETP07949 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
RETP07949 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RETP07949 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.16□□□□□ -0.14
RETP07949 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RETP07949 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RETP07949 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.16□□□□□ -0.14
RETP07949 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RETP07949 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RETP07949 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.16□□□□□ -0.14
RETP07949 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RETP07949 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RETP07949 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.15□□□□□ -0.14
RETP07949 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RETP07949 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.15□□□□□ -0.14
RETP07949 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RETP07949 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RETP07949 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RETP07949 AC090505.1-201ENST00000430515 1834 ntBASIC14.15□□□□□ -0.14
RETP07949 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RETP07949 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RETP07949 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.15□□□□□ -0.14
RETP07949 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RETP07949 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RETP07949 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RETP07949 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RETP07949 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RETP07949 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.15□□□□□ -0.14
RETP07949 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.15□□□□□ -0.14
RETP07949 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RETP07949 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RETP07949 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RETP07949 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RETP07949 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC14.15□□□□□ -0.14
RETP07949 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RETP07949 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RETP07949 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RETP07949 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RETP07949 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC14.15□□□□□ -0.14
RETP07949 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.15□□□□□ -0.14
RETP07949 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC14.15□□□□□ -0.14
RETP07949 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
RETP07949 AC006529.1-201ENST00000459978 637 ntBASIC14.15□□□□□ -0.14
RETP07949 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.15□□□□□ -0.14
RETP07949 BCL2L12P1-201ENST00000508390 733 ntBASIC14.15□□□□□ -0.14
RETP07949 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC14.15□□□□□ -0.14
RETP07949 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.15□□□□□ -0.14
RETP07949 AC092862.1-201ENST00000541534 533 ntBASIC14.15□□□□□ -0.14
RETP07949 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
RETP07949 AC140658.4-201ENST00000561990 352 ntBASIC14.15□□□□□ -0.14
RETP07949 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC14.15□□□□□ -0.14
RETP07949 SNORD3B-1-201ENST00000577988 758 ntBASIC14.15□□□□□ -0.14
RETP07949 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC14.15□□□□□ -0.14
RETP07949 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC14.15□□□□□ -0.14
RETP07949 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.15□□□□□ -0.14
RETP07949 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
RETP07949 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RETP07949 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RETP07949 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RETP07949 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RETP07949 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.15□□□□□ -0.14
RETP07949 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.15□□□□□ -0.14
RETP07949 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RETP07949 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.15□□□□□ -0.14
RETP07949 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RETP07949 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.15□□□□□ -0.14
RETP07949 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.15□□□□□ -0.15
RETP07949 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RETP07949 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
RETP07949 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.14□□□□□ -0.15
RETP07949 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RETP07949 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.14□□□□□ -0.15
RETP07949 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.14□□□□□ -0.15
RETP07949 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
RETP07949 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
RETP07949 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 BRD7P5-201ENST00000299197 1822 ntBASIC14.14□□□□□ -0.15
RETP07949 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.14□□□□□ -0.15
RETP07949 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.14□□□□□ -0.15
RETP07949 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RETP07949 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 ASS1P2-201ENST00000439895 1223 ntBASIC14.14□□□□□ -0.15
RETP07949 HNRNPA1P42-201ENST00000458678 957 ntBASIC14.14□□□□□ -0.15
RETP07949 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC14.14□□□□□ -0.15
RETP07949 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms