Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 NHP2P1-201ENST00000335274 462 ntBASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 AC005274.1-201ENST00000623460 802 ntBASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 AC026748.1-201ENST00000624349 3251 ntBASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 AL022313.4-201ENST00000562756 2046 ntBASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.25□□□□□ -0.29
CCDC187A0A096LP49 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 HNRNPA1P2-207ENST00000432375 960 ntBASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 EEF1DP2-201ENST00000433698 843 ntBASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 ESR1-214ENST00000638569 132 ntTSL 5 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 INTS4P1-203ENST00000641008 3683 ntBASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 AC090505.1-201ENST00000430515 1834 ntBASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CCDC187A0A096LP49 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC187A0A096LP49 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms