Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SLF1Q9BQI6 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.33■□□□□ 0.21
SLF1Q9BQI6 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLF1Q9BQI6 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLF1Q9BQI6 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
SLF1Q9BQI6 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SLF1Q9BQI6 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC16.33■□□□□ 0.21
SLF1Q9BQI6 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLF1Q9BQI6 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLF1Q9BQI6 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SLF1Q9BQI6 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLF1Q9BQI6 RNVU1-8-201ENST00000364272 125 ntBASIC16.33■□□□□ 0.2
SLF1Q9BQI6 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLF1Q9BQI6 HMGA1P1-201ENST00000415560 1062 ntBASIC16.33■□□□□ 0.2
SLF1Q9BQI6 RPL13AP19-201ENST00000434320 584 ntBASIC16.33■□□□□ 0.2
SLF1Q9BQI6 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.33■□□□□ 0.2
SLF1Q9BQI6 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC16.33■□□□□ 0.2
SLF1Q9BQI6 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.33■□□□□ 0.2
SLF1Q9BQI6 MIR4265-201ENST00000582152 99 ntBASIC16.33■□□□□ 0.2
SLF1Q9BQI6 AP005264.5-201ENST00000590066 467 ntBASIC16.33■□□□□ 0.2
SLF1Q9BQI6 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.33■□□□□ 0.2
SLF1Q9BQI6 AC138466.5-201ENST00000624002 808 ntBASIC16.33■□□□□ 0.2
SLF1Q9BQI6 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLF1Q9BQI6 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLF1Q9BQI6 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLF1Q9BQI6 KRT8P43-201ENST00000406052 1458 ntBASIC16.33■□□□□ 0.2
SLF1Q9BQI6 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
SLF1Q9BQI6 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLF1Q9BQI6 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLF1Q9BQI6 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC16.33■□□□□ 0.2
SLF1Q9BQI6 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SLF1Q9BQI6 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLF1Q9BQI6 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLF1Q9BQI6 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.33■□□□□ 0.2
SLF1Q9BQI6 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLF1Q9BQI6 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 AC019109.1-201ENST00000401725 1874 ntBASIC16.32■□□□□ 0.2
SLF1Q9BQI6 AL590824.1-201ENST00000403828 1349 ntBASIC16.32■□□□□ 0.2
SLF1Q9BQI6 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 AC097065.1-201ENST00000425737 517 ntBASIC16.32■□□□□ 0.2
SLF1Q9BQI6 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 AC084752.1-201ENST00000509766 622 ntBASIC16.32■□□□□ 0.2
SLF1Q9BQI6 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 SNORD3B-1-201ENST00000577988 758 ntBASIC16.32■□□□□ 0.2
SLF1Q9BQI6 AC012617.1-204ENST00000586340 2305 ntBASIC16.32■□□□□ 0.2
SLF1Q9BQI6 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 AL359881.3-201ENST00000602640 1721 ntBASIC16.32■□□□□ 0.2
SLF1Q9BQI6 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 AC002044.2-201ENST00000624910 970 ntBASIC16.32■□□□□ 0.2
SLF1Q9BQI6 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLF1Q9BQI6 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 ODCP-201ENST00000459650 1639 ntBASIC16.31■□□□□ 0.2
SLF1Q9BQI6 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms