Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 AL662799.1-202ENST00000614205 422 ntBASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 AL513210.1-201ENST00000629608 234 ntBASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 AC026992.2-203ENST00000563004 2419 ntBASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 MCU-204ENST00000536019 3224 ntTSL 2 BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SMIM11BQ8TCY0 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
SMIM11BQ8TCY0 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC9.15□□□□□ -0.95
SMIM11BQ8TCY0 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC9.15□□□□□ -0.95
SMIM11BQ8TCY0 FLJ30679-201ENST00000624773 1980 ntBASIC9.15□□□□□ -0.95
SMIM11BQ8TCY0 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
SMIM11BQ8TCY0 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
SMIM11BQ8TCY0 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
SMIM11BQ8TCY0 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
SMIM11BQ8TCY0 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
SMIM11BQ8TCY0 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
SMIM11BQ8TCY0 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
SMIM11BQ8TCY0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
SMIM11BQ8TCY0 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
SMIM11BQ8TCY0 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
SMIM11BQ8TCY0 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC9.15□□□□□ -0.95
SMIM11BQ8TCY0 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC9.15□□□□□ -0.95
SMIM11BQ8TCY0 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 CTAGE10P-201ENST00000318353 2408 ntBASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 AMT-239ENST00000636865 1914 ntTSL 5 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 TEX30-203ENST00000376022 828 ntTSL 2 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 AC004461.1-201ENST00000412461 403 ntBASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 SSR4P1-201ENST00000415143 412 ntBASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 CEND1P1-201ENST00000451006 455 ntBASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 KRT18P56-201ENST00000507275 550 ntBASIC9.14□□□□□ -0.95
SMIM11BQ8TCY0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC9.14□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms