Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM50Q86XT4 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TRIM50Q86XT4 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 PRSS3P1-201ENST00000503996 742 ntBASIC15.64■□□□□ 0.09
TRIM50Q86XT4 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM50Q86XT4 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 MST1P2-201ENST00000457982 2291 ntBASIC15.63■□□□□ 0.09
TRIM50Q86XT4 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 ACTG1P19-201ENST00000418987 1116 ntBASIC15.63■□□□□ 0.09
TRIM50Q86XT4 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 GNG10P1-201ENST00000452289 199 ntBASIC15.63■□□□□ 0.09
TRIM50Q86XT4 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 AC011471.3-201ENST00000623576 402 ntBASIC15.63■□□□□ 0.09
TRIM50Q86XT4 AL451007.2-201ENST00000632004 563 ntBASIC15.63■□□□□ 0.09
TRIM50Q86XT4 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 AC004554.1-201ENST00000422830 1468 ntBASIC15.63■□□□□ 0.09
TRIM50Q86XT4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM50Q86XT4 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 AL009178.2-201ENST00000597278 2719 ntBASIC15.62■□□□□ 0.09
TRIM50Q86XT4 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM50Q86XT4 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms