Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 AC152010.1-201ENST00000415779 2006 ntBASIC9.44□□□□□ -0.9
SCXQ7RTU7 FES-203ENST00000394302 2133 ntTSL 5 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 DPM3-202ENST00000368399 517 ntBASIC9.44□□□□□ -0.9
SCXQ7RTU7 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 HNRNPA1P36-201ENST00000521313 955 ntBASIC9.44□□□□□ -0.9
SCXQ7RTU7 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 FOS-206ENST00000555347 1280 ntTSL 2 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 COG4-212ENST00000564653 590 ntTSL 5 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 RN7SL163P-201ENST00000583100 276 ntBASIC9.44□□□□□ -0.9
SCXQ7RTU7 BNIP3P13-201ENST00000599968 566 ntBASIC9.44□□□□□ -0.9
SCXQ7RTU7 AL645939.5-201ENST00000606834 243 ntBASIC9.44□□□□□ -0.9
SCXQ7RTU7 AC026740.1-201ENST00000607068 791 ntBASIC9.44□□□□□ -0.9
SCXQ7RTU7 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 AL162426.1-201ENST00000624141 743 ntBASIC9.44□□□□□ -0.9
SCXQ7RTU7 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 AC004923.1-202ENST00000642106 209 ntBASIC9.44□□□□□ -0.9
SCXQ7RTU7 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 AC004899.1-201ENST00000424687 1714 ntBASIC9.44□□□□□ -0.9
SCXQ7RTU7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
SCXQ7RTU7 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
SCXQ7RTU7 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 PID1-202ENST00000392054 2745 ntTSL 2 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 AC010336.1-201ENST00000539278 4739 ntBASIC9.43□□□□□ -0.9
SCXQ7RTU7 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SCXQ7RTU7 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
SCXQ7RTU7 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms