Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 AC138969.2-201ENST00000532739 9932 ntBASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 AC041040.1-201ENST00000425197 460 ntBASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 PGK1P2-201ENST00000431702 1214 ntBASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 RPS18P9-201ENST00000482817 460 ntBASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM71Q2Q1W2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 AC097376.2-205ENST00000610159 5334 ntBASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 RN7SL605P-201ENST00000577229 281 ntBASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 MIR4746-201ENST00000579802 71 ntBASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 RN7SL121P-201ENST00000584223 273 ntBASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 AC089987.1-201ENST00000551654 2209 ntBASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 AC020931.1-201ENST00000589622 1346 ntBASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM71Q2Q1W2 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 AL390755.1-201ENST00000623716 2027 ntBASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
TRIM71Q2Q1W2 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms