Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GABREP78334 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
GABREP78334 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GABREP78334 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
GABREP78334 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.34□□□□□ -0.27
GABREP78334 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GABREP78334 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
GABREP78334 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GABREP78334 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GABREP78334 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GABREP78334 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC13.34□□□□□ -0.27
GABREP78334 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.34□□□□□ -0.27
GABREP78334 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
GABREP78334 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.34□□□□□ -0.27
GABREP78334 POM121L4P-202ENST00000427789 1891 ntBASIC13.34□□□□□ -0.27
GABREP78334 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC13.34□□□□□ -0.27
GABREP78334 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GABREP78334 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GABREP78334 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GABREP78334 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GABREP78334 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GABREP78334 ABCD1P4-201ENST00000399687 604 ntBASIC13.34□□□□□ -0.27
GABREP78334 RPL3P2-204ENST00000413027 1203 ntBASIC13.34□□□□□ -0.27
GABREP78334 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC13.34□□□□□ -0.27
GABREP78334 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC13.34□□□□□ -0.27
GABREP78334 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC13.34□□□□□ -0.27
GABREP78334 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC13.34□□□□□ -0.27
GABREP78334 DLK1-205ENST00000556051 469 ntTSL 2 BASIC13.34□□□□□ -0.27
GABREP78334 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC13.34□□□□□ -0.27
GABREP78334 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC13.34□□□□□ -0.27
GABREP78334 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC13.34□□□□□ -0.27
GABREP78334 AC104506.1-201ENST00000609247 429 ntBASIC13.34□□□□□ -0.27
GABREP78334 PLS3-210ENST00000626746 216 ntTSL 4 BASIC13.34□□□□□ -0.27
GABREP78334 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
GABREP78334 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.34□□□□□ -0.27
GABREP78334 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GABREP78334 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.34□□□□□ -0.27
GABREP78334 AC215219.1-201ENST00000400706 1817 ntBASIC13.34□□□□□ -0.27
GABREP78334 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GABREP78334 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GABREP78334 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GABREP78334 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
GABREP78334 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GABREP78334 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.34□□□□□ -0.27
GABREP78334 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.34□□□□□ -0.27
GABREP78334 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
GABREP78334 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.34□□□□□ -0.27
GABREP78334 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC13.34□□□□□ -0.27
GABREP78334 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GABREP78334 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.34□□□□□ -0.27
GABREP78334 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
GABREP78334 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
GABREP78334 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GABREP78334 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
GABREP78334 TBC1D27-202ENST00000424239 1573 ntBASIC13.33□□□□□ -0.28
GABREP78334 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GABREP78334 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GABREP78334 AC015656.1-201ENST00000624209 3578 ntBASIC13.33□□□□□ -0.28
GABREP78334 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
GABREP78334 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.33□□□□□ -0.28
GABREP78334 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.33□□□□□ -0.28
GABREP78334 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
GABREP78334 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.33□□□□□ -0.28
GABREP78334 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.33□□□□□ -0.28
GABREP78334 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GABREP78334 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GABREP78334 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC13.33□□□□□ -0.28
GABREP78334 SSR4-202ENST00000370085 526 ntTSL 2 BASIC13.33□□□□□ -0.28
GABREP78334 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC13.33□□□□□ -0.28
GABREP78334 OR2W2P-201ENST00000406313 909 ntBASIC13.33□□□□□ -0.28
GABREP78334 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC13.33□□□□□ -0.28
GABREP78334 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC13.33□□□□□ -0.28
GABREP78334 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC13.33□□□□□ -0.28
GABREP78334 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC13.33□□□□□ -0.28
GABREP78334 AC092903.1-201ENST00000466506 262 ntBASIC13.33□□□□□ -0.28
GABREP78334 RN7SL147P-201ENST00000487345 298 ntBASIC13.33□□□□□ -0.28
GABREP78334 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC13.33□□□□□ -0.28
GABREP78334 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
GABREP78334 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GABREP78334 F11R-204ENST00000537746 1245 ntTSL 2 BASIC13.33□□□□□ -0.28
GABREP78334 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GABREP78334 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC13.33□□□□□ -0.28
GABREP78334 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.33□□□□□ -0.28
GABREP78334 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC13.33□□□□□ -0.28
GABREP78334 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
GABREP78334 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.33□□□□□ -0.28
GABREP78334 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.33□□□□□ -0.28
GABREP78334 AC132825.4-202ENST00000578792 434 ntBASIC13.33□□□□□ -0.28
GABREP78334 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GABREP78334 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC13.33□□□□□ -0.28
GABREP78334 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC13.33□□□□□ -0.28
GABREP78334 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
GABREP78334 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GABREP78334 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.33□□□□□ -0.28
GABREP78334 KRT8P43-201ENST00000406052 1458 ntBASIC13.33□□□□□ -0.28
GABREP78334 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
GABREP78334 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
GABREP78334 AC005912.2-201ENST00000619492 2400 ntBASIC13.33□□□□□ -0.28
GABREP78334 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.33□□□□□ -0.28
GABREP78334 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms