Protein–RNA interactions for Protein: P49840

GSK3A, Glycogen synthase kinase-3 alpha, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3AP49840 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.39□□□□□ -0.43
GSK3AP49840 PGAM1P5-201ENST00000548011 764 ntBASIC12.39□□□□□ -0.43
GSK3AP49840 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GSK3AP49840 AC140658.4-201ENST00000561990 352 ntBASIC12.39□□□□□ -0.43
GSK3AP49840 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GSK3AP49840 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.39□□□□□ -0.43
GSK3AP49840 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
GSK3AP49840 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.39□□□□□ -0.43
GSK3AP49840 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.39□□□□□ -0.43
GSK3AP49840 AC004908.3-201ENST00000610248 625 ntBASIC12.39□□□□□ -0.43
GSK3AP49840 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
GSK3AP49840 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GSK3AP49840 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GSK3AP49840 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
GSK3AP49840 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
GSK3AP49840 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
GSK3AP49840 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
GSK3AP49840 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GSK3AP49840 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
GSK3AP49840 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
GSK3AP49840 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
GSK3AP49840 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GSK3AP49840 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
GSK3AP49840 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GSK3AP49840 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
GSK3AP49840 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
GSK3AP49840 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
GSK3AP49840 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
GSK3AP49840 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.38□□□□□ -0.43
GSK3AP49840 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
GSK3AP49840 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
GSK3AP49840 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
GSK3AP49840 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.38□□□□□ -0.43
GSK3AP49840 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.38□□□□□ -0.43
GSK3AP49840 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.38□□□□□ -0.43
GSK3AP49840 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.38□□□□□ -0.43
GSK3AP49840 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 AL118506.1-201ENST00000601296 3082 ntBASIC12.38□□□□□ -0.43
GSK3AP49840 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.38□□□□□ -0.43
GSK3AP49840 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
GSK3AP49840 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.38□□□□□ -0.43
GSK3AP49840 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.38□□□□□ -0.43
GSK3AP49840 RPSAP36-202ENST00000494591 1261 ntBASIC12.38□□□□□ -0.43
GSK3AP49840 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.38□□□□□ -0.43
GSK3AP49840 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
GSK3AP49840 RNA5SP412-201ENST00000516234 123 ntBASIC12.38□□□□□ -0.43
GSK3AP49840 IGHV3-71-201ENST00000523324 359 ntBASIC12.38□□□□□ -0.43
GSK3AP49840 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.38□□□□□ -0.43
GSK3AP49840 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.38□□□□□ -0.43
GSK3AP49840 AL512310.5-201ENST00000551999 515 ntBASIC12.38□□□□□ -0.43
GSK3AP49840 AC005730.2-201ENST00000564549 1184 ntBASIC12.38□□□□□ -0.43
GSK3AP49840 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.38□□□□□ -0.43
GSK3AP49840 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.38□□□□□ -0.43
GSK3AP49840 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.38□□□□□ -0.43
GSK3AP49840 MIR4259-201ENST00000584466 101 ntBASIC12.38□□□□□ -0.43
GSK3AP49840 AC008805.1-201ENST00000590892 364 ntBASIC12.38□□□□□ -0.43
GSK3AP49840 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.38□□□□□ -0.43
GSK3AP49840 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
GSK3AP49840 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
GSK3AP49840 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
GSK3AP49840 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
GSK3AP49840 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
GSK3AP49840 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
GSK3AP49840 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
GSK3AP49840 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GSK3AP49840 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
GSK3AP49840 AHCYP4-201ENST00000419201 1315 ntBASIC12.37□□□□□ -0.43
GSK3AP49840 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
GSK3AP49840 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
GSK3AP49840 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
GSK3AP49840 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
GSK3AP49840 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GSK3AP49840 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
GSK3AP49840 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GSK3AP49840 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GSK3AP49840 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms