Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
MTHFRP42898 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
MTHFRP42898 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MTHFRP42898 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MTHFRP42898 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC14.67□□□□□ -0.06
MTHFRP42898 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
MTHFRP42898 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MTHFRP42898 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.67□□□□□ -0.06
MTHFRP42898 LINC01230-201ENST00000625222 3017 ntBASIC14.67□□□□□ -0.06
MTHFRP42898 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.67□□□□□ -0.06
MTHFRP42898 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MTHFRP42898 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
MTHFRP42898 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
MTHFRP42898 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MTHFRP42898 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MTHFRP42898 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MTHFRP42898 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
MTHFRP42898 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC14.67□□□□□ -0.06
MTHFRP42898 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC14.67□□□□□ -0.06
MTHFRP42898 NRADDP-201ENST00000437305 691 ntBASIC14.67□□□□□ -0.06
MTHFRP42898 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC14.67□□□□□ -0.06
MTHFRP42898 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC14.67□□□□□ -0.06
MTHFRP42898 RN7SL128P-201ENST00000467883 305 ntBASIC14.67□□□□□ -0.06
MTHFRP42898 RN7SL147P-201ENST00000487345 298 ntBASIC14.67□□□□□ -0.06
MTHFRP42898 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC14.67□□□□□ -0.06
MTHFRP42898 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.67□□□□□ -0.06
MTHFRP42898 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC14.67□□□□□ -0.06
MTHFRP42898 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC14.67□□□□□ -0.06
MTHFRP42898 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC14.67□□□□□ -0.06
MTHFRP42898 MIR6074-201ENST00000612054 107 ntBASIC14.67□□□□□ -0.06
MTHFRP42898 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC14.67□□□□□ -0.06
MTHFRP42898 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
MTHFRP42898 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
MTHFRP42898 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MTHFRP42898 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MTHFRP42898 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MTHFRP42898 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
MTHFRP42898 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.67□□□□□ -0.06
MTHFRP42898 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
MTHFRP42898 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.67□□□□□ -0.06
MTHFRP42898 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
MTHFRP42898 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.67□□□□□ -0.06
MTHFRP42898 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MTHFRP42898 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
MTHFRP42898 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MTHFRP42898 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MTHFRP42898 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MTHFRP42898 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MTHFRP42898 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MTHFRP42898 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC14.66□□□□□ -0.06
MTHFRP42898 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
MTHFRP42898 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.66□□□□□ -0.06
MTHFRP42898 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
MTHFRP42898 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.66□□□□□ -0.06
MTHFRP42898 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
MTHFRP42898 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
MTHFRP42898 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
MTHFRP42898 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.66□□□□□ -0.06
MTHFRP42898 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 KRT8P43-201ENST00000406052 1458 ntBASIC14.66□□□□□ -0.06
MTHFRP42898 AC007952.5-201ENST00000572818 1486 ntBASIC14.66□□□□□ -0.06
MTHFRP42898 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
MTHFRP42898 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 AC092570.1-201ENST00000414446 469 ntBASIC14.66□□□□□ -0.06
MTHFRP42898 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.66□□□□□ -0.06
MTHFRP42898 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
MTHFRP42898 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC14.66□□□□□ -0.06
MTHFRP42898 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 GOLGA2P8-201ENST00000505201 779 ntBASIC14.66□□□□□ -0.06
MTHFRP42898 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC14.66□□□□□ -0.06
MTHFRP42898 BAK1P2-201ENST00000532665 631 ntBASIC14.66□□□□□ -0.06
MTHFRP42898 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 AC018846.1-201ENST00000568231 183 ntBASIC14.66□□□□□ -0.06
MTHFRP42898 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC14.66□□□□□ -0.06
MTHFRP42898 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC14.66□□□□□ -0.06
MTHFRP42898 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
MTHFRP42898 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.66□□□□□ -0.06
MTHFRP42898 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MTHFRP42898 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.66□□□□□ -0.06
MTHFRP42898 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.66□□□□□ -0.06
MTHFRP42898 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.66□□□□□ -0.06
MTHFRP42898 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
MTHFRP42898 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms